RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1111077", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1111077 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26783115 26783115 PRJNA1111077_P_NODE_36581_length_241_cov_0.916667_g36360_i0 PRJNA1111077 36581 241 0.916667 2.20916747 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 77.4 2.28e-14   NR MBI3455978.1 2053607 g36360 i0 57.7 0.970954356846473 78 31 95.9 2 11 241 255 331 MBI3455978.1 hypothetical protein [Candidatus Rokuibacteriota bacterium] diamond 234 77.4 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
27447233 27447233 PRJNA1111077_P_NODE_28083_length_258_cov_2.729730_g27862_i0 PRJNA1111077 28083 258 2.72973 7.0427034 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 127 8.799999999999999e-33   NR PYM60699.1 2053607 g27862 i0 77.4 2.93023255813953 84 19 97.7 0 5 256 310 393 PYM60699.1 MAG: thymidylate synthase, partial [Candidatus Rokuibacteriota bacterium] diamond 756 127 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;