RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1108487" and tax_phylum = "Preaxostyla"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1108487 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9141037 9141037 PRJNA1108487_P_NODE_3028_length_390_cov_2.397476_g2962_i0 PRJNA1108487 3028 390 2.397476 9.3501564 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 92.4 2.51e-21   NR KAJ4453711.1 342808 g2962 i0 62.1 0.507692307692308 66 25 50.8 0 344 147 2 67 KAJ4453711.1 putative 60S acidic ribosomal protein P1 [Paratrimastix pyriformis] diamond 198 92.4 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
12499414 12499414 PRJNA1108487_P_NODE_10190_length_246_cov_0.901734_g10124_i0 PRJNA1108487 10190 246 0.901734 2.21826564 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 88.6 2.81e-18   NR KAK2964795.1 2049346 g10124 i0 51.8 4.08536585365854 85 37 98.8 2 244 2 303 387 KAK2964795.1 putative CCR4-NOT transcription complex subunit 8 [Blattamonas nauphoetae] diamond 1005 89 0.995505617977528 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae
12967268 12967268 PRJNA1108487_P_NODE_4111_length_342_cov_2.063197_g4045_i0 PRJNA1108487 4111 342 2.063197 7.05613374 uncultured Oxymonadida sp. 413579 Preaxostyla other_Eukaryota 351 2.85e-92   NTclustered gi|119116878|gb|DQ924975.1| 413579 g4045 i0 86.42 93.3216374269006 324 41 94 3 6 328 951 630 Unidentified Oxymonadida clone 1 alpha-tubulin (Atub) mRNA, partial cds blastn 31916 351 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida     uncultured Oxymonadida sp.
28827289 28827289 PRJNA1108487_P_NODE_4688_length_323_cov_5.640000_g4622_i0 PRJNA1108487 4688 323 5.64 18.2172 root 1 Root_unresolved Root_unresolved 111 1.59e-29   NR KAA6379614.1 222440 g4622 i0 58.2 3.3343653250774 91 38 84.5 0 320 48 3 93 KAA6379614.1 MAG: hypothetical protein EZS28_024857 [Streblomastix strix] diamond 1077 111 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
31806130 31806130 PRJNA1108487_P_NODE_857_length_698_cov_2.364800_g796_i0 PRJNA1108487 857 698 2.3648 16.506304 Streblomastix strix 222440 Preaxostyla other_Eukaryota 152 1.1e-41   NR KAA6375409.1 222440 g796 i0 40.6 0.962750716332378 224 120 95 7 25 687 5 218 KAA6375409.1 MAG: putative autophagy protein 3 [Streblomastix strix] diamond 672 152 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
32407355 32407355 PRJNA1108487_P_NODE_11179_length_242_cov_0.923077_g11113_i0 PRJNA1108487 11179 242 0.923077 2.23384634 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 120 1.22e-29   NR KAJ4456816.1 342808 g11113 i0 67.5 1.98347107438017 80 26 99.2 0 2 241 91 170 KAJ4456816.1 putative Ribosome biogenesis protein BMS1 [Paratrimastix pyriformis] diamond 480 120 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;