RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1108487", tax_phylum = "Nanobdellota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nanobdellota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1108487 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28236041 28236041 PRJNA1108487_P_NODE_7866_length_259_cov_2.516129_g7800_i0 PRJNA1108487 7866 259 2.516129 6.51677411 Nanobdellota archaeon 2026764 Archaea Archaea 115 1.5600000000000002e-27   NR MCA9485224.1 2026764 g7800 i0 67.1 0.915057915057915 79 26 91.5 0 245 9 285 363 MCA9485224.1 GTP-binding protein [Nanoarchaeota archaeon] diamond 237 115 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
29467352 29467352 PRJNA1108487_P_NODE_9530_length_248_cov_1.782857_g9464_i0 PRJNA1108487 9530 248 1.782857 4.42148536 Nanobdellota archaeon 2026764 Archaea Archaea 87.8 5.46e-18   NR MCA9485224.1 2026764 g9464 i0 47.5 0.967741935483871 80 42 96.8 0 244 5 228 307 MCA9485224.1 GTP-binding protein [Nanoarchaeota archaeon] diamond 240 87.8 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
31521598 31521598 PRJNA1108487_P_NODE_4476_length_330_cov_1.214008_g4410_i0 PRJNA1108487 4476 330 1.214008 4.0062264 Nanobdellota archaeon 2026764 Archaea Archaea 46.6 0.00413   NR MEK6901749.1 2026764 g4410 i0 39 1.04545454545455 59 27 45.5 1 175 324 65 123 MEK6901749.1 OB-fold nucleic acid binding domain-containing protein [Nanoarchaeota archaeon] diamond 345 46.6 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;