RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

27 rows where bioproject = "PRJNA1108487" and tax_phylum = "Discosea"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 27 ✖

tax_clade 1

bioproject 1

  • PRJNA1108487 · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
213402 213402 PRJNA1108487_P_NODE_2161_length_461_cov_3.319588_g2095_i0 PRJNA1108487 2161 461 3.319588 15.30330068 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 259 2.46e-64   NTclustered gi|470420864|ref|XM_004337293.1| 1257118 g2095 i0 82.026 50.0802603036876 306 53 66 2 1 305 328 24 Acanthamoeba castellanii str. Neff Peptidylprolyl cis-trans isomerase (ACA1_221090), partial mRNA blastn 23087 259 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5316299 5316299 PRJNA1108487_P_NODE_1785_length_505_cov_1.479167_g1719_i0 PRJNA1108487 1785 505 1.479167 7.46979335 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 226 2.5e-68   NR XP_004338851.1 1257118 g1719 i0 66.7 5.97029702970297 168 53 99.2 2 503 3 358 523 XP_004338851.1 glucose6-phosphate dehydrogenase, C-terminal domain containing protein [Acanthamoeba castellanii str. Neff] diamond 3015 226 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5316314 5316314 PRJNA1108487_P_NODE_3805_length_353_cov_1.489286_g3739_i0 PRJNA1108487 3805 353 1.489286 5.25717958 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 58.4 7.17e-4   NTclustered gi|470469416|ref|XM_004341948.1| 1257118 g3739 i0 83.077 0.18413597733711 65 9 18 2 216 279 884 821 Acanthamoeba castellanii str. Neff MORN repeatcontaining protein (ACA1_050500), partial mRNA blastn 65 58.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6591538 6591538 PRJNA1108487_P_NODE_726_length_758_cov_18.759124_g667_i0 PRJNA1108487 726 758 18.759124 142.19415992 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 344 1.12e-89   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g667 i0 79.31 61.0488126649077 522 85 67 18 197 707 522 13 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 46275 344 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9141065 9141065 PRJNA1108487_P_NODE_5588_length_301_cov_1.175439_g5522_i0 PRJNA1108487 5588 301 1.175439 3.53807139 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 171 7.37e-53   NR XP_004339588.1 1257118 g5522 i0 83.7 0.976744186046512 98 16 97.7 0 300 7 14 111 XP_004339588.1 60S ribosomal protein, putative [Acanthamoeba castellanii str. Neff] diamond 294 171 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9141074 9141074 PRJNA1108487_P_NODE_7348_length_267_cov_1.608247_g7282_i0 PRJNA1108487 7348 267 1.608247 4.29401949 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 127 2.15e-32   NR XP_004334901.1 1257118 g7282 i0 64.4 0.97752808988764 87 31 97.8 0 5 265 34 120 XP_004334901.1 plastin 3 (T isoform), putative [Acanthamoeba castellanii str. Neff] diamond 261 127 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15516043 15516043 PRJNA1108487_P_NODE_533_length_875_cov_2.316708_g480_i0 PRJNA1108487 533 875 2.316708 20.271195 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 544 1.19e-149   NTclustered gi|470510585|ref|XM_004351497.1| 1257118 g480 i0 78.207 92.2822857142857 881 170 99 16 6 875 493 1362 Acanthamoeba castellanii str. Neff transport protein Sec61 alpha subunit, putative (ACA1_149400), partial mRNA blastn 80747 544 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20614565 20614565 PRJNA1108487_P_NODE_4917_length_317_cov_1.598361_g4851_i0 PRJNA1108487 4917 317 1.598361 5.06680437 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 104 1.86e-24   NR XP_004353067.1 1257118 g4851 i0 59 1.53312302839117 83 34 78.5 0 65 313 21 103 XP_004353067.1 short-chain dehydrogenase [Acanthamoeba castellanii str. Neff] diamond 486 104 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21890253 21890253 PRJNA1108487_P_NODE_5638_length_300_cov_1.030837_g5572_i0 PRJNA1108487 5638 300 1.030837 3.092511 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 148 2.1399999999999996e-41   NR XP_004368068.1 1257118 g5572 i0 74.4 2.66 90 23 90 0 274 5 9 98 XP_004368068.1 arsenite transporter, putative [Acanthamoeba castellanii str. Neff] diamond 798 148 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21890269 21890269 PRJNA1108487_P_NODE_7958_length_258_cov_1.513514_g7892_i0 PRJNA1108487 7958 258 1.513514 3.90486612 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 115 1.09e-29   NR XP_004368096.1 1257118 g7892 i0 69.4 0.988372093023256 85 26 98.8 0 256 2 113 197 XP_004368096.1 ribulosephosphate 3-epimerase [Acanthamoeba castellanii str. Neff] diamond 255 115 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24439300 24439300 PRJNA1108487_P_NODE_1020_length_652_cov_2.027634_g957_i0 PRJNA1108487 1020 652 2.027634 13.22017368 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 355 4.41e-93   NTclustered gi|470512227|ref|XM_004352398.1| 1257118 g957 i0 78.061 75.0061349693252 588 112 89 13 17 597 31 608 Acanthamoeba castellanii str. Neff succinyl coenzyme A synthetase alpha subunit (ACA1_359750), partial mRNA blastn 48904 355 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26814670 26814670 PRJNA1108487_P_NODE_10401_length_245_cov_0.906977_g10335_i0 PRJNA1108487 10401 245 0.906977 2.22209365 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 96.3 5.3100000000000005e-21   NR XP_004335352.1 1257118 g10335 i0 54.3 0.991836734693878 81 37 99.2 0 2 244 441 521 XP_004335352.1 uncharacterized protein ACA1_239560 [Acanthamoeba castellanii str. Neff] diamond 243 96.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26972716 26972716 PRJNA1108487_P_NODE_1922_length_490_cov_1.122302_g1856_i0 PRJNA1108487 1922 490 1.122302 5.4992798 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 147 6.63e-38   NR XP_004367592.1 1257118 g1856 i0 43.7 1.02244897959184 167 81 99.8 4 490 2 234 391 XP_004367592.1 acyloxyacyl hydrolase [Acanthamoeba castellanii str. Neff] diamond 501 147 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27162328 27162328 PRJNA1108487_P_NODE_10862_length_243_cov_1.376471_g10796_i0 PRJNA1108487 10862 243 1.376471 3.34482453 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 86.3 1.83e-17   NR XP_004358057.1 1257118 g10796 i0 53.8 0.987654320987654 80 37 98.8 0 1 240 234 313 XP_004358057.1 peptidase [Acanthamoeba castellanii str. Neff] diamond 240 86.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28394103 28394103 PRJNA1108487_P_NODE_3366_length_372_cov_1.357860_g3300_i0 PRJNA1108487 3366 372 1.35786 5.0512392 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 47 0.00478   NR XP_004368172.1 1257118 g3300 i0 33.3 1.31451612903226 81 50 63.7 2 237 1 25 103 XP_004368172.1 uncharacterized protein ACA1_293880 [Acanthamoeba castellanii str. Neff] diamond 489 47 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29057340 29057340 PRJNA1108487_P_NODE_7128_length_271_cov_1.505051_g7062_i0 PRJNA1108487 7128 271 1.505051 4.07868821 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 50.4 1.02e-4   NR XP_004335242.1 1257118 g7062 i0 32.4 1.70479704797048 71 48 78.6 0 15 227 277 347 XP_004335242.1 serine/threonine kinase [Acanthamoeba castellanii str. Neff] diamond 462 50.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29562288 29562288 PRJNA1108487_P_NODE_9590_length_248_cov_0.891429_g9524_i0 PRJNA1108487 9590 248 0.891429 2.21074392 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 44.7 0.00808   NR XP_004336790.1 1257118 g9524 i0 26.5 1.00403225806452 83 60 99.2 1 246 1 69 151 XP_004336790.1 kelch repeat protein [Acanthamoeba castellanii str. Neff] diamond 249 44.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29878315 29878315 PRJNA1108487_P_NODE_3591_length_362_cov_1.079585_g3525_i0 PRJNA1108487 3591 362 1.079585 3.9080977 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 78.6 6.77e-15   NR XP_004341641.1 1257118 g3525 i0 35.5 1.00276243093923 121 73 97 4 11 361 5 124 XP_004341641.1 uncharacterized protein ACA1_270300 [Acanthamoeba castellanii str. Neff] diamond 363 78.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30130580 30130580 PRJNA1108487_P_NODE_9472_length_249_cov_0.886364_g9406_i0 PRJNA1108487 9472 249 0.886364 2.20704636 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 51.6 2.66e-5   NR XP_004337111.1 1257118 g9406 i0 36.3 0.963855421686747 80 50 95.2 1 249 13 14 93 XP_004337111.1 uncharacterized protein ACA1_215700 [Acanthamoeba castellanii str. Neff] diamond 240 51.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30352634 30352634 PRJNA1108487_P_NODE_1572_length_533_cov_3.236957_g1506_i0 PRJNA1108487 1572 533 3.236957 17.25298081 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 87.8 7.52e-17   NR XP_004337248.1 1257118 g1506 i0 57.6 0.371482176360225 66 28 37.1 0 200 3 136 201 XP_004337248.1 alternative oxidase isoform B, putative [Acanthamoeba castellanii str. Neff] diamond 198 87.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30762926 30762926 PRJNA1108487_P_NODE_9234_length_250_cov_0.881356_g9168_i0 PRJNA1108487 9234 250 0.881356 2.20339 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 85.9 2.67e-17   NR XP_004341866.1 1257118 g9168 i0 51.3 0.96 80 32 96 1 2 241 122 194 XP_004341866.1 transmembrane 9 superfamily protein member 4, putative [Acanthamoeba castellanii str. Neff] diamond 240 85.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31047474 31047474 PRJNA1108487_P_NODE_11215_length_242_cov_0.923077_g11149_i0 PRJNA1108487 11215 242 0.923077 2.23384634 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 84.3 2.36e-17   NR XP_004338074.1 1257118 g11149 i0 71.2 0.90495867768595 73 19 90.5 1 11 229 164 234 XP_004338074.1 TolAlike protein [Acanthamoeba castellanii str. Neff] diamond 219 84.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31300037 31300037 PRJNA1108487_P_NODE_8895_length_251_cov_0.876404_g8829_i0 PRJNA1108487 8895 251 0.876404 2.19977404 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 83.2 1.61e-16   NR XP_004335421.1 1257118 g8829 i0 52 1.82868525896414 75 36 89.6 0 2 226 193 267 XP_004335421.1 PCI domain containing protein [Acanthamoeba castellanii str. Neff] diamond 459 83.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31331604 31331604 PRJNA1108487_P_NODE_3296_length_375_cov_5.569536_g3230_i0 PRJNA1108487 3296 375 5.569536 20.88576 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 57.8 9.46e-8   NR XP_004340136.1 1257118 g3230 i0 35.2 1.64 105 62 83.2 2 314 3 4 103 XP_004340136.1 actin related protein 2/3 complex, subunit 5like, putative [Acanthamoeba castellanii str. Neff] diamond 615 57.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31987098 31987098 PRJNA1108487_P_NODE_7918_length_259_cov_0.967742_g7852_i0 PRJNA1108487 7918 259 0.967742 2.50645178 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 89.7 1.22e-19   NR XP_004335873.1 1257118 g7852 i0 54.4 6.82239382239382 79 36 91.5 0 240 4 22 100 XP_004335873.1 RNA recognition domain containing protein [Acanthamoeba castellanii str. Neff] diamond 1767 89.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32145471 32145471 PRJNA1108487_P_NODE_10138_length_246_cov_0.901734_g10072_i0 PRJNA1108487 10138 246 0.901734 2.21826564 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 116 1.25e-30   NR XP_004333640.1 1257118 g10072 i0 62.2 7 82 31 100 0 246 1 106 187 XP_004333640.1 peroxiredoxin 2, putative [Acanthamoeba castellanii str. Neff] diamond 1722 117 0.991452991452991 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32470769 32470769 PRJNA1108487_P_NODE_10519_length_245_cov_0.906977_g10453_i0 PRJNA1108487 10519 245 0.906977 2.22209365 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 111 5.8200000000000006e-27   NR XP_004339122.1 1257118 g10453 i0 71.1 0.930612244897959 76 22 93.1 0 232 5 161 236 XP_004339122.1 methyltransferase domain containing protein [Acanthamoeba castellanii str. Neff] diamond 228 111 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;