RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1108487" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1108487 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1488118 1488118 PRJNA1108487_P_NODE_6342_length_285_cov_1.471698_g6276_i0 PRJNA1108487 6342 285 1.471698 4.1943393 Fungi 4751 Fungi Fungi 127 2.56e-33   NR EPZ33240.1 988480 g6276 i0 65.3 11 95 33 100 0 285 1 44 138 EPZ33240.1 Ribosomal protein L10/acidic P0 domain-containing protein [Rozella allomycis CSF55] diamond 3135 127 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
18065105 18065105 PRJNA1108487_P_NODE_3595_length_362_cov_0.927336_g3529_i0 PRJNA1108487 3595 362 0.927336 3.35695632 Eukaryota 2759 Fungi Fungi 58.9 2.95e-7   NR RKP19638.1 988480 g3529 i0 28.7 3.78729281767956 115 56 95.3 1 360 16 442 530 RKP19638.1 GDP-mannose 4,6-dehydratase [Rozella allomycis CSF55] diamond 1371 58.9 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;