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contig_metadata

26 rows where bioproject = "PRJNA1108487" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 26 ✖

tax_clade 1

bioproject 1

  • PRJNA1108487 · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
213408 213408 PRJNA1108487_P_NODE_3241_length_378_cov_2.281967_g3175_i0 PRJNA1108487 3241 378 2.281967 8.62583526 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 70.9 1.88e-11   NR CAD2098058.1 119398 g3175 i0 39.3 2.11904761904762 89 54 70.6 0 4 270 217 305 CAD2098058.1 conserved Plasmodium protein, unknown function [Plasmodium vinckei brucechwatti] diamond 801 70.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
2764142 2764142 PRJNA1108487_P_NODE_2943_length_395_cov_1.375776_g2877_i0 PRJNA1108487 2943 395 1.375776 5.4343152 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 138 3.98e-37   NR OEH77157.1 88456 g2877 i0 73 3.39493670886076 89 24 67.6 0 24 290 209 297 OEH77157.1 60s ribosomal protein [Cyclospora cayetanensis] diamond 1341 138 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
4040204 4040204 PRJNA1108487_P_NODE_2404_length_437_cov_1.258242_g2338_i0 PRJNA1108487 2404 437 1.258242 5.49851754 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 67.6 1.51e-6   NTclustered gi|921130065|ref|XM_013584114.1| 51315 g2338 i0 97.436 2.1533180778032 39 1 9 0 395 433 1069 1107 Eimeria necatrix U3 small nucleolar ribonucleoprotein protein MPP10, putative partial mRNA blastn 941 67.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
4040220 4040220 PRJNA1108487_P_NODE_4744_length_322_cov_1.253012_g4678_i0 PRJNA1108487 4744 322 1.253012 4.03469864 Babesia 5864 SAR_Eukaryotes SAR_Eukaryotes 124 3.07e-30   NR XP_067715094.1 5871 g4678 i0 66.7 3.38198757763975 90 30 83.9 0 322 53 1126 1215 XP_067715094.1 eukaryotic translation initiation factor [Babesia caballi] diamond 1089 125 0.992 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia caballi
5316324 5316324 PRJNA1108487_P_NODE_6145_length_289_cov_1.444444_g6079_i0 PRJNA1108487 6145 289 1.444444 4.17444316 Eimeria praecox 51316 SAR_Eukaryotes SAR_Eukaryotes 73.1 2.05e-8   NTclustered gi|2638822883|emb|OY986962.1| 51316 g6079 i0 97.619 16.5328719723183 42 1 15 0 232 273 22345 22304 Eimeria praecox genome assembly, organelle: plastid:chloroplast blastn 4778 73.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria praecox
12967244 12967244 PRJNA1108487_P_NODE_10251_length_246_cov_0.901734_g10185_i0 PRJNA1108487 10251 246 0.901734 2.21826564 Babesia 5864 SAR_Eukaryotes SAR_Eukaryotes 102 7.76e-25   NR KAK1933150.1 32595 g10185 i0 58.3 8.81707317073171 72 30 87.8 0 218 3 3 74 KAK1933150.1 Rab1b [Babesia divergens] diamond 2169 103 0.990291262135922 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia divergens
12967281 12967281 PRJNA1108487_P_NODE_5851_length_295_cov_1.405405_g5785_i0 PRJNA1108487 5851 295 1.405405 4.14594475 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.027   NTclustered gi|916504441|ref|XM_013497445.1| 44415 g5785 i0 100 0.0949152542372881 28 0 9 0 234 261 116 143 Eimeria mitis uncharacterized protein (EMH_0006120), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
15048282 15048282 PRJNA1108487_P_NODE_4632_length_325_cov_1.384921_g4566_i0 PRJNA1108487 4632 325 1.384921 4.50099325 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 213 1.32e-50   NTclustered gi|160318|gb|M86865.1|PFAH2AA 5833 g4566 i0 83.122 12.9384615384615 237 37 73 3 22 257 309 75 Plasmodium falciparum histone 2A (H2A) mRNA, complete cds blastn 4205 213 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
15516057 15516057 PRJNA1108487_P_NODE_8113_length_256_cov_1.109290_g8047_i0 PRJNA1108487 8113 256 1.10929 2.8397824 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 145 6.51e-40   NR CAD61332.1 5811 g8047 i0 86.9 66.9375 84 11 98.4 0 254 3 254 337 CAD61332.1 putative vacuolar H+ ATPase subunit B [Toxoplasma gondii] diamond 17136 146 0.993150684931507 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
16790601 16790601 PRJNA1108487_P_NODE_9954_length_247_cov_0.896552_g9888_i0 PRJNA1108487 9954 247 0.896552 2.21448344 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 195 3.51e-45   NTclustered gi|401402052|ref|XM_003881109.1| 572307 g9888 i0 81.59 91.6072874493927 239 40 96 4 11 247 85 321 Neospora caninum Liverpool putative ubiquitin / ribosomal protein CEP52 fusion protein (NCLIV_042000), partial mRNA blastn 22627 195 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
20146948 20146948 PRJNA1108487_P_NODE_6956_length_273_cov_2.150000_g6890_i0 PRJNA1108487 6956 273 2.15 5.8695 Babesia 5864 SAR_Eukaryotes SAR_Eukaryotes 202 2.3499999999999996e-47   NTclustered gi|527100028|dbj|AK441278.1| 5865 g6890 i0 83.333 78.4652014652015 222 33 81 4 1 220 671 890 Babesia bovis BBOV_III011800 mRNA for ribosomal protein L2 family protein, complete cds, clone: XBBk012367, strain: Texas blastn 21421 202 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bovis
21890244 21890244 PRJNA1108487_P_NODE_3718_length_357_cov_1.373239_g3652_i0 PRJNA1108487 3718 357 1.373239 4.90246323 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 91.7 9.99e-19   NR UKJ87904.1 68886 g3652 i0 46.6 1.71428571428571 103 49 84.9 2 357 55 407 505 UKJ87904.1 glycyl-tRNA synthetase [Theileria orientalis] diamond 612 91.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
24439307 24439307 PRJNA1108487_P_NODE_11720_length_205_cov_5.098485_g11654_i0 PRJNA1108487 11720 205 5.098485 10.45189425 Cryptosporidium sp. chipmunk genotype I 1280935 SAR_Eukaryotes SAR_Eukaryotes 102 1.75e-17   NTclustered gi|2787704165|ref|XM_067344148.1| 1280935 g11654 i0 83.036 14.8878048780488 112 19 55 0 94 205 229 118 Cryptosporidium sp. chipmunk genotype I 60S ribosomal L40 (ELE39_001109), partial mRNA blastn 3052 102 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium sp. chipmunk genotype I
26963946 26963946 PRJNA1108487_P_NODE_9982_length_247_cov_0.896552_g9916_i0 PRJNA1108487 9982 247 0.896552 2.21448344 Piroplasmida 5863 SAR_Eukaryotes SAR_Eukaryotes 70.1 9e-12   NR XP_001609485.1 484906 g9916 i0 42.1 5.62348178137652 76 44 92.3 0 20 247 414 489 XP_001609485.1 putative calcium-dependent protein kinase 4 [Babesia bovis T2Bo] diamond 1389 70.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bovis
27564296 27564296 PRJNA1108487_P_NODE_5844_length_295_cov_1.720721_g5778_i0 PRJNA1108487 5844 295 1.720721 5.07612695 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 149 4.39e-41   NR KAF8820926.1 476202 g5778 i0 77.3 16.7694915254237 97 22 98.6 0 293 3 65 161 KAF8820926.1 putative 26S proteasome regulatory subunit 6b [Cardiosporidium cionae] diamond 4947 150 0.993333333333333 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
28836133 28836133 PRJNA1108487_P_NODE_7228_length_269_cov_1.591837_g7162_i0 PRJNA1108487 7228 269 1.591837 4.28204153 Cryptosporidium ubiquitum 857276 SAR_Eukaryotes SAR_Eukaryotes 52.4 2.02e-5   NR XP_028874876.1 857276 g7162 i0 42.9 4.94052044609665 91 50 99.3 2 267 1 9 99 XP_028874876.1 epsin like ENTH VHS domain-containing protein [Cryptosporidium ubiquitum] diamond 1329 52.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ubiquitum
28899173 28899173 PRJNA1108487_P_NODE_2228_length_454_cov_1.587927_g2162_i0 PRJNA1108487 2228 454 1.587927 7.20918858 Cryptosporidium xiaoi 659607 SAR_Eukaryotes SAR_Eukaryotes 73.6 3.55e-13   NR KAK6588730.1 659607 g2162 i0 53.6 0.555066079295154 84 31 55.5 2 452 201 86 161 KAK6588730.1 hypothetical protein RS030_333721, partial [Cryptosporidium xiaoi] diamond 252 73.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium xiaoi
29593601 29593601 PRJNA1108487_P_NODE_4690_length_323_cov_3.648000_g4624_i0 PRJNA1108487 4690 323 3.648 11.78304 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 84.3 2.04e-16   NR XP_013440316.1 51315 g4624 i0 50 0.705882352941177 76 38 70.6 0 1 228 382 457 XP_013440316.1 RAB GDP dissociation inhibitor alpha, putative [Eimeria necatrix] diamond 228 84.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
29878322 29878322 PRJNA1108487_P_NODE_7751_length_261_cov_1.659574_g7685_i0 PRJNA1108487 7751 261 1.659574 4.33148814 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 92.8 6.44e-20   NR XP_029217209.1 94643 g7685 i0 45.2 2.91954022988506 84 46 96.6 0 9 260 312 395 XP_029217209.1 GDP-D-mannose pyrophosphorylase [Besnoitia besnoiti] diamond 762 92.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
30690833 30690833 PRJNA1108487_P_NODE_9653_length_248_cov_0.891429_g9587_i0 PRJNA1108487 9653 248 0.891429 2.21074392 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 125 3.21e-34   NR KAF8818749.1 476202 g9587 i0 68.4 4.83870967741935 79 25 95.6 0 248 12 63 141 KAF8818749.1 ribosomal protein RPL13A [Cardiosporidium cionae] diamond 1200 126 0.992063492063492 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
30762919 30762919 PRJNA1108487_P_NODE_11394_length_241_cov_2.321429_g11328_i0 PRJNA1108487 11394 241 2.321429 5.59464389 Babesia ovis 5869 SAR_Eukaryotes SAR_Eukaryotes 95.1 3.9e-23   NR GFE54039.1 5869 g11328 i0 60.8 4.49377593360996 74 29 92.1 0 223 2 5 78 GFE54039.1 60S ribosomal protein L31 [Babesia ovis] diamond 1083 95.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovis
30857513 30857513 PRJNA1108487_P_NODE_7554_length_264_cov_1.607330_g7488_i0 PRJNA1108487 7554 264 1.60733 4.2433512 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 62.8 4.08e-9   NR XP_029217297.1 94643 g7488 i0 37.9 2.96590909090909 87 36 98.9 2 263 3 320 388 XP_029217297.1 putative 26s proteasome subunit p55 [Besnoitia besnoiti] diamond 783 62.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
31141601 31141601 PRJNA1108487_P_NODE_1835_length_498_cov_8.167059_g1769_i0 PRJNA1108487 1835 498 8.167059 40.67195382 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 201 3.76e-62   NR OEH76901.1 88456 g1769 i0 65 3.92168674698795 163 57 98.2 0 494 6 29 191 OEH76901.1 ribosomal protein rpl19 [Cyclospora cayetanensis] diamond 1953 201 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
31987097 31987097 PRJNA1108487_P_NODE_7618_length_263_cov_1.642105_g7552_i0 PRJNA1108487 7618 263 1.642105 4.31873615 Aconoidasida 422676 SAR_Eukaryotes SAR_Eukaryotes 60.8 1.33e-8   NR KAK1443510.1 33632 g7552 i0 45.9 1.38022813688213 74 35 84.4 1 262 41 181 249 KAK1443510.1 glutamine phosphoribosylpyrophosphate [Babesia gibsoni] diamond 363 61.2 0.993464052287582 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia gibsoni
32659699 32659699 PRJNA1108487_P_NODE_4780_length_321_cov_1.258065_g4714_i0 PRJNA1108487 4780 321 1.258065 4.03838865 Babesia ovis 5869 SAR_Eukaryotes SAR_Eukaryotes 76.6 3.25e-14   NR GFE54248.1 5869 g4714 i0 39.2 0.738317757009346 79 48 73.8 0 239 3 97 175 GFE54248.1 hypothetical protein BaOVIS_016520 [Babesia ovis] diamond 237 76.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovis
32745814 32745814 PRJNA1108487_P_NODE_5640_length_300_cov_1.030837_g5574_i0 PRJNA1108487 5640 300 1.030837 3.092511 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 79.7 3.43e-17   NR KAK9171662.1 93969 g5574 i0 50 3.06 76 37 76 1 256 29 5 79 KAK9171662.1 Small nuclear ribonucleoprotein G [Cryptosporidium meleagridis] diamond 918 80.1 0.995006242197254 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;