RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1108487" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA1108487 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31300034 31300034 PRJNA1108487_P_NODE_715_length_763_cov_2.279710_g656_i0 PRJNA1108487 715 763 2.27971 17.3941873 Candidatus Geocrenenecus arthurdayi 2978060 Archaea Archaea 70.1 3.27e-10   NR MCL7388697.1 2978060 g656 i0 38.8 0.404980340760157 103 59 40.5 3 439 747 25 123 MCL7388697.1 hypothetical protein [Candidatus Geocrenenecus arthurdayi] diamond 309 70.1 1 Archaea   Thermoproteati Nitrososphaerota     Candidatus Wolframiiraptoraceae Candidatus Geocrenenecus Candidatus Geocrenenecus arthurdayi
31458339 31458339 PRJNA1108487_P_NODE_5336_length_307_cov_1.465812_g5270_i0 PRJNA1108487 5336 307 1.465812 4.50004284 Desulfurococcaceae archaeon 2184738 Archaea Archaea 80.1 1.49e-15   NR MCC6021498.1 2184738 g5270 i0 44.6 13.7296416938111 101 56 98.7 0 2 304 48 148 MCC6021498.1 slipin family protein [Desulfurococcaceae archaeon] diamond 4215 80.1 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae   Desulfurococcaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;