RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1108487" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA1108487 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20614577 20614577 PRJNA1108487_P_NODE_7697_length_262_cov_1.333333_g7631_i0 PRJNA1108487 7697 262 1.333333 3.49333246 root 1 Root_unresolved Root_unresolved 127 5.5e-33   NR AYV82508.1 2487770 g7631 i0 72.9 5.88549618320611 85 23 97.3 0 255 1 67 151 AYV82508.1 MAG: glutamate 5-kinase [Hyperionvirus sp.] diamond 1542 127 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Hyperionvirus sp.
27257372 27257372 PRJNA1108487_P_NODE_4403_length_332_cov_1.741313_g4337_i0 PRJNA1108487 4403 332 1.7413130000000001 5.78115916 Hyperionvirus sp. 2487770 Viruses Viruses 79.7 2.2e-16   NR AYV84473.1 2487770 g4337 i0 40.9 0.795180722891566 88 48 79.5 2 274 11 7 90 AYV84473.1 MAG: hypothetical protein Hyperionvirus26_28 [Hyperionvirus sp.] diamond 264 79.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Hyperionvirus sp.
28931013 28931013 PRJNA1108487_P_NODE_5928_length_293_cov_1.763636_g5862_i0 PRJNA1108487 5928 293 1.763636 5.16745348 Yasminevirus sp. GU-2 3060817 Viruses Viruses 73.6 5.85e-13   NR VBB18459.1 2420051 g5862 i0 48.6 0.737201365187713 72 37 73.7 0 240 25 183 254 VBB18459.1 class I SAM-dependent methyltransferase [Yasminevirus sp. GU-2018] diamond 216 73.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Yasminevirus Yasminevirus saudimassiliense

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;