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contig_metadata

17 rows where bioproject = "PRJNA1108487", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 17 ✖

tax_clade 1

  • Sar · 17 ✖

bioproject 1

  • PRJNA1108487 · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
213416 213416 PRJNA1108487_P_NODE_4661_length_324_cov_1.549801_g4595_i0 PRJNA1108487 4661 324 1.549801 5.02135524 Sorites sp. isolate X-1646 313723 SAR_Eukaryotes SAR_Eukaryotes 326 1.62e-84   NTclustered gi|59859695|gb|AY764016.1| 313723 g4595 i0 84.877 95.6203703703704 324 47 99 2 1 323 604 282 Sorites sp. isolate X-1646 clone SoA611_2 actin type 1 gene, partial cds blastn 30981 326 1 Eukaryota Sar   Foraminifera   Miliolida Soritidae   Sorites sp. isolate X-1646
16790577 16790577 PRJNA1108487_P_NODE_5334_length_307_cov_1.658120_g5268_i0 PRJNA1108487 5334 307 1.65812 5.0904284 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 113 1.04e-26   NR ETO30124.1 46433 g5268 i0 58.1 2.814332247557 93 37 90.9 1 21 299 246 336 ETO30124.1 carboxylesterase, partial [Reticulomyxa filosa] diamond 864 113 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
20614551 20614551 PRJNA1108487_P_NODE_3077_length_388_cov_1.117460_g3011_i0 PRJNA1108487 3077 388 1.11746 4.3357448 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 153 2.4e-42   NR ETO30003.1 46433 g3011 i0 55.8 0.997422680412371 129 56 99 1 384 1 188 316 ETO30003.1 hypothetical protein RFI_07116 [Reticulomyxa filosa] diamond 387 153 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27604995 27604995 PRJNA1108487_P_NODE_8964_length_251_cov_0.876404_g8898_i0 PRJNA1108487 8964 251 0.876404 2.19977404 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 92.4 2.98e-20   NR ETO06942.1 46433 g8898 i0 50.6 1.93625498007968 83 41 99.2 0 250 2 154 236 ETO06942.1 6-phosphofructokinase [Reticulomyxa filosa] diamond 486 92.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27668116 27668116 PRJNA1108487_P_NODE_5424_length_305_cov_1.293103_g5358_i0 PRJNA1108487 5424 305 1.293103 3.94396415 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 109 2.33e-25   NR ETO26723.1 46433 g5358 i0 55.1 0.963934426229508 98 43 95.4 1 2 292 476 573 ETO26723.1 protein of unknown function DUF1929 [Reticulomyxa filosa] diamond 294 109 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28109865 28109865 PRJNA1108487_P_NODE_8165_length_255_cov_1.274725_g8099_i0 PRJNA1108487 8165 255 1.274725 3.25054875 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.0111   NR ETO28672.1 46433 g8099 i0 46 1.50588235294118 63 33 72.9 1 251 66 159 221 ETO28672.1 Ubiquitin family protein [Reticulomyxa filosa] diamond 384 44.3 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28330957 28330957 PRJNA1108487_P_NODE_7646_length_263_cov_1.078947_g7580_i0 PRJNA1108487 7646 263 1.078947 2.83763061 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 65.5 4.75e-10   NR ETO33686.1 46433 g7580 i0 38.9 1.02661596958175 90 44 90.1 2 18 254 694 783 ETO33686.1 hypothetical protein RFI_03416 [Reticulomyxa filosa] diamond 270 65.5 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28552194 28552194 PRJNA1108487_P_NODE_1187_length_609_cov_2.479478_g1123_i0 PRJNA1108487 1187 609 2.479478 15.10002102 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 160 5.29e-46   NR ETO17530.1 46433 g1123 i0 85.1 2.29556650246305 94 14 46.3 0 604 323 98 191 ETO17530.1 hypothetical protein RFI_19788 [Reticulomyxa filosa] diamond 1398 160 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28804403 28804403 PRJNA1108487_P_NODE_3248_length_378_cov_1.495082_g3182_i0 PRJNA1108487 3248 378 1.495082 5.65140996 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 72.4 7.03e-12   NR ETO26723.1 46433 g3182 i0 60.8 0.404761904761905 51 20 40.5 0 377 225 593 643 ETO26723.1 protein of unknown function DUF1929 [Reticulomyxa filosa] diamond 153 72.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
29111802 29111802 PRJNA1108487_P_NODE_4088_length_343_cov_1.155556_g4022_i0 PRJNA1108487 4088 343 1.155556 3.96355708 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 81.3 1.04e-15   NR ETO23384.1 46433 g4022 i0 43.5 3.36734693877551 92 50 80.5 1 68 343 27 116 ETO23384.1 hypothetical protein RFI_13798 [Reticulomyxa filosa] diamond 1155 81.3 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30604761 30604761 PRJNA1108487_P_NODE_11213_length_242_cov_0.923077_g11147_i0 PRJNA1108487 11213 242 0.923077 2.23384634 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 85.9 2.38e-17   NR ETO30774.1 46433 g11147 i0 52.8 1.78512396694215 72 34 89.3 0 219 4 338 409 ETO30774.1 trehalose phosphate synthase, partial [Reticulomyxa filosa] diamond 432 85.9 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30636261 30636261 PRJNA1108487_P_NODE_9153_length_250_cov_0.881356_g9087_i0 PRJNA1108487 9153 250 0.881356 2.20339 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 80.9 1.67e-17   NR ETO13143.1 46433 g9087 i0 56.3 4.644 64 26 74.4 1 4 189 52 115 ETO13143.1 hypothetical protein RFI_24232 [Reticulomyxa filosa] diamond 1161 80.9 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31647776 31647776 PRJNA1108487_P_NODE_6077_length_290_cov_2.092166_g6011_i0 PRJNA1108487 6077 290 2.092166 6.0672814 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 107 1.23e-24   NR ETO26723.1 46433 g6011 i0 53 1.03448275862069 100 42 98.3 2 6 290 365 464 ETO26723.1 protein of unknown function DUF1929 [Reticulomyxa filosa] diamond 300 107 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31901019 31901019 PRJNA1108487_P_NODE_11397_length_241_cov_2.261905_g11331_i0 PRJNA1108487 11397 241 2.261905 5.45119105 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 87.4 3.59e-18   NR ETO09627.1 46433 g11331 i0 53.9 1.84232365145228 76 35 94.6 0 239 12 138 213 ETO09627.1 hypothetical protein RFI_27749 [Reticulomyxa filosa] diamond 444 87.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32122703 32122703 PRJNA1108487_P_NODE_7758_length_261_cov_1.659574_g7692_i0 PRJNA1108487 7758 261 1.659574 4.33148814 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 79.3 2.56e-15   NR ETO26526.1 46433 g7692 i0 54.4 1.49425287356322 68 31 78.2 0 56 259 24 91 ETO26526.1 RAB32, member RAS oncogene family [Reticulomyxa filosa] diamond 390 79.3 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32502442 32502442 PRJNA1108487_P_NODE_5459_length_304_cov_1.350649_g5393_i0 PRJNA1108487 5459 304 1.350649 4.10597296 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 73.9 3.82e-14   NR ETO27543.1 46433 g5393 i0 64 0.493421052631579 50 18 49.3 0 304 155 21 70 ETO27543.1 hypothetical protein RFI_09592, partial [Reticulomyxa filosa] diamond 150 73.9 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32808626 32808626 PRJNA1108487_P_NODE_3480_length_367_cov_1.476190_g3414_i0 PRJNA1108487 3480 367 1.47619 5.4176173 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 102 3.73e-24   NR ETO26558.1 46433 g3414 i0 65.2 4.59400544959128 69 24 56.4 0 360 154 2 70 ETO26558.1 hypothetical protein RFI_10581 [Reticulomyxa filosa] diamond 1686 102 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;