RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1108009" and tax_phylum = "Nanobdellota"

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tax_superkingdom 1

tax_phylum 1

  • Nanobdellota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1108009 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27352422 27352422 PRJNA1108009_P_NODE_23403_length_260_cov_1.411765_g23085_i0 PRJNA1108009 23403 260 1.411765 3.670589 Nanobdellota archaeon 2026764 Archaea Archaea 112 1.05e-26   NR MCA9485224.1 2026764 g23085 i0 60.5 0.992307692307692 86 34 99.2 0 258 1 271 356 MCA9485224.1 GTP-binding protein [Nanoarchaeota archaeon] diamond 258 112 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
28615249 28615249 PRJNA1108009_P_NODE_12107_length_384_cov_1.485531_g11789_i0 PRJNA1108009 12107 384 1.485531 5.70443904 Nanobdellota archaeon 2026764 Archaea Archaea 162 1.98e-43   NR MCA9485224.1 2026764 g11789 i0 56.7 0.9921875 127 55 99.2 0 382 2 152 278 MCA9485224.1 GTP-binding protein [Nanoarchaeota archaeon] diamond 381 162 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;