RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1108009" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1108009 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28710073 28710073 PRJNA1108009_P_NODE_30607_length_242_cov_2.437870_g30289_i0 PRJNA1108009 30607 242 2.43787 5.8996454 Candidatus Omnitrophus magneticus 1609969 Bacteria Bacteria 68.2 3.72e-11   NR KJJ84228.1 1609969 g30289 i0 72.5 1.88429752066116 40 11 49.6 0 80 199 16 55 KJJ84228.1 S-adenosylmethionine synthetase [Candidatus Omnitrophus magneticus] diamond 456 68.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota       Candidatus Omnitrophus Candidatus Omnitrophus magneticus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;