RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1108009", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA1108009 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27952172 27952172 PRJNA1108009_P_NODE_30445_length_243_cov_0.905882_g30127_i0 PRJNA1108009 30445 243 0.905882 2.20129326 Aminivibrio sp. 1872489 Bacteria Bacteria 96.7 1.6400000000000002e-21   NR WP_367339685.1 1872489 g30127 i0 54.8 1.03703703703704 84 35 100 2 243 1 280 363 WP_367339685.1 M24 family metallopeptidase [Aminivibrio sp.] diamond 252 96.7 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Aminivibrio Aminivibrio sp.
31110165 31110165 PRJNA1108009_P_NODE_18815_length_298_cov_1.506667_g18497_i0 PRJNA1108009 18815 298 1.506667 4.48986766 Synergistaceae bacterium 2053624 Bacteria Bacteria 60.1 1.45e-8   NR MDR2137471.1 2053624 g18497 i0 38.5 0.966442953020134 96 46 89.6 4 280 14 23 112 MDR2137471.1 TerD family protein [Synergistaceae bacterium] diamond 288 60.1 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;