RNAquarium Metadata Server
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contig_metadata

11 rows where bioproject = "PRJNA1108009", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 11 ✖

tax_kingdom 1

  • Metazoa · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA1108009 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6591057 6591057 PRJNA1108009_P_NODE_21706_length_274_cov_1.318408_g21388_i0 PRJNA1108009 21706 274 1.318408 3.61243792 Brachionus rotundiformis 96890 Rotifera other_Eukaryota 132 3.1400000000000003e-26   NTclustered gi|1066800225|gb|KX364936.1| 96890 g21388 i0 85.294 46.6970802919708 136 10 50 6 139 274 9474 9599 Brachionus rotundiformis chromosome I mitochondrion, complete sequence blastn 12795 132 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rotundiformis
15515633 15515633 PRJNA1108009_P_NODE_24153_length_254_cov_1.701657_g23835_i0 PRJNA1108009 24153 254 1.701657 4.32220878 Seison nebaliae 104778 Rotifera other_Eukaryota 110 1.41e-27   NR KAI3378587.1 104778 g23835 i0 66.7 0.885826771653543 75 25 88.6 0 29 253 1 75 KAI3378587.1 hypothetical protein SNEBB_007110 [Seison nebaliae] diamond 225 110 1 Eukaryota Opisthokonta Metazoa Rotifera Pararotatoria Seisonacea Seisonidae Seison Seison nebaliae
23165267 23165267 PRJNA1108009_P_NODE_22339_length_269_cov_1.122449_g22021_i0 PRJNA1108009 22339 269 1.122449 3.01938781 Philodina citrina 468664 Rotifera other_Eukaryota 324 4.73e-84   NTclustered gi|407227484|emb|FR856884.1| 468664 g22021 i0 88.848 5.31598513011152 269 23 99 5 1 266 2111 2375 Philodina citrina complete mitochondrial genome blastn 1430 324 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
27352427 27352427 PRJNA1108009_P_NODE_26123_length_249_cov_0.875000_g25805_i0 PRJNA1108009 26123 249 0.875 2.17875 Philodina citrina 468664 Rotifera other_Eukaryota 85.1 2.59e-17   NR CCA94471.1 468664 g25805 i0 81.6 1.18072289156627 49 9 59 0 78 224 112 160 CCA94471.1 Cytochrome B [Philodina citrina] diamond 294 85.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
27857328 27857328 PRJNA1108009_P_NODE_24945_length_251_cov_0.865169_g24627_i0 PRJNA1108009 24945 251 0.865169 2.17157419 Rotaria sordida 392033 Rotifera other_Eukaryota 45.8 0.00327   NR CAF1508723.1 392033 g24627 i0 33.3 1.86454183266932 78 52 93.2 0 243 10 353 430 CAF1508723.1 unnamed protein product, partial [Rotaria sordida] diamond 468 45.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
30280595 30280595 PRJNA1108009_P_NODE_28112_length_246_cov_0.890173_g27794_i0 PRJNA1108009 28112 246 0.890173 2.18982558 root 1 Root_unresolved Root_unresolved 55.8 9.33e-7   NR CAF0767582.1 1234261 g27794 i0 55.8 2.10975609756098 43 19 52.4 0 245 117 981 1023 CAF0767582.1 unnamed protein product [Didymodactylos carnosus] diamond 519 55.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
30731176 30731176 PRJNA1108009_P_NODE_30954_length_242_cov_0.911243_g30636_i0 PRJNA1108009 30954 242 0.911243 2.20520806 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 85.1 3.77e-17   NR CAF2677723.1 2762512 g30636 i0 49.4 4.77272727272727 77 36 91.7 1 223 2 222 298 CAF2677723.1 unnamed protein product [Rotaria sp. Silwood2] diamond 1155 85.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2
31078904 31078904 PRJNA1108009_P_NODE_21675_length_274_cov_1.557214_g21357_i0 PRJNA1108009 21675 274 1.557214 4.26676636 Adineta steineri 433720 Rotifera other_Eukaryota 94.4 4.08e-20   NR CAF0828795.1 433720 g21357 i0 50.5 10.7846715328467 93 41 98.5 2 271 2 2448 2538 CAF0828795.1 unnamed protein product [Adineta steineri] diamond 2955 94.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
31110167 31110167 PRJNA1108009_P_NODE_20955_length_280_cov_1.285024_g20637_i0 PRJNA1108009 20955 280 1.285024 3.5980672 Adineta vaga 104782 Rotifera other_Eukaryota 45.4 0.00682   NR UJR09469.1 104782 g20637 i0 39.5 1.56428571428571 43 26 46.1 0 152 280 1220 1262 UJR09469.1 hypothetical protein I4U23_013707 [Adineta vaga] diamond 438 45.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
31354656 31354656 PRJNA1108009_P_NODE_21696_length_274_cov_1.467662_g21378_i0 PRJNA1108009 21696 274 1.467662 4.02139388 Opisthokonta 33154 Rotifera other_Eukaryota 43.9 0.0209   NR UJR26290.1 104782 g21378 i0 37.3 4.6970802919708 51 30 53.6 1 148 2 193 243 UJR26290.1 hypothetical protein I4U23_007628 [Adineta vaga] diamond 1287 44.3 0.99097065462754 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
31584872 31584872 PRJNA1108009_P_NODE_29296_length_244_cov_1.356725_g28978_i0 PRJNA1108009 29296 244 1.356725 3.310409 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 115 1.11e-29   NR CAF0767949.1 104777 g28978 i0 80.2 0.995901639344262 81 16 99.6 0 243 1 23 103 CAF0767949.1 unnamed protein product [Brachionus calyciflorus] diamond 243 115 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;