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contig_metadata

16 rows where bioproject = "PRJNA1108009" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 16 ✖

bioproject 1

  • PRJNA1108009 · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2295894 2295894 PRJNA1108009_P_NODE_13662_length_358_cov_1.578947_g13344_i0 PRJNA1108009 13662 358 1.578947 5.65263026 Eukaryota 2759 Plants Plants 145 2.48e-39   NR KAF5836058.1 3046 g13344 i0 60.7 15.0418994413408 117 45 97.2 1 2 349 193 309 KAF5836058.1 component of cytosolic 80S ribosome and 60S large subunit [Dunaliella salina] diamond 5385 146 0.993150684931507 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
6591208 6591208 PRJNA1108009_P_NODE_27506_length_247_cov_0.885057_g27188_i0 PRJNA1108009 27506 247 0.885057 2.18609079 Chlamydomonas reinhardtii 3055 Plants Plants 200 7.529999999999999e-47   NTclustered gi|18250309|gb|AY050666.1| 3055 g27188 i0 81.452 76.1619433198381 248 42 99 4 1 246 566 321 Chlamydomonas reinhardtii eukaryotic release factor 1 mRNA, complete cds blastn 18812 200 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
11691428 11691428 PRJNA1108009_P_NODE_13130_length_366_cov_1.406143_g12812_i0 PRJNA1108009 13130 366 1.406143 5.14648338 Haematococcus lacustris 44745 Plants Plants 385 3.02e-102   NTclustered gi|1279575454|gb|MF683078.1| 44745 g12812 i0 85.637 175.03825136612 369 49 100 4 1 366 3590 3223 Haematococcus lacustris 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast blastn 64064 385 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
26878142 26878142 PRJNA1108009_P_NODE_21481_length_276_cov_1.137931_g21163_i0 PRJNA1108009 21481 276 1.137931 3.14068956 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 65.5 2.23e-10   NR KAF6263477.1 2650976 g21163 i0 51.8 0.902173913043478 83 40 90.2 0 26 274 5 87 KAF6263477.1 60S ribosomal protein L7 [Scenedesmus sp. NREL 46B-D3] diamond 249 65.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
27510208 27510208 PRJNA1108009_P_NODE_28143_length_246_cov_0.890173_g27825_i0 PRJNA1108009 28143 246 0.890173 2.18982558 Tetradesmus obliquus 3088 Plants Plants 45.4 0.00411   NR WIA17126.1 3088 g27825 i0 28.4 0.902439024390244 74 53 90.2 0 226 5 248 321 WIA17126.1 hypothetical protein OEZ85_014019 [Tetradesmus obliquus] diamond 222 45.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
28488948 28488948 PRJNA1108009_P_NODE_30247_length_243_cov_0.905882_g29929_i0 PRJNA1108009 30247 243 0.905882 2.20129326 Tetradesmus obliquus 3088 Plants Plants 92 1.54e-19   NR WIA12288.1 3088 g29929 i0 53.3 3.7037037037037 75 35 92.6 0 225 1 269 343 WIA12288.1 hypothetical protein OEZ85_012345 [Tetradesmus obliquus] diamond 900 92 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
29301161 29301161 PRJNA1108009_P_NODE_11229_length_400_cov_1.397554_g10911_i0 PRJNA1108009 11229 400 1.397554 5.590216 Eukaryota 2759 Plants Plants 111 1.8e-25   NR KAL4856227.1 3077 g10911 i0 63.2 5.985 133 47 99.8 1 400 2 2034 2164 KAL4856227.1 Guanine nucleotide-binding protein subunit beta-like protein [Chlorella vulgaris] diamond 2394 111 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
29783353 29783353 PRJNA1108009_P_NODE_15331_length_336_cov_1.171103_g15013_i0 PRJNA1108009 15331 336 1.171103 3.93490608 Raphidocelis subcapitata 307507 Plants Plants 169 2.38e-51   NR GBF92135.1 307507 g15013 i0 69.6 11.9196428571429 112 34 100 0 336 1 33 144 GBF92135.1 40S ribosomal protein S13 [Raphidocelis subcapitata] diamond 4005 169 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
29964294 29964294 PRJNA1108009_P_NODE_26131_length_249_cov_0.875000_g25813_i0 PRJNA1108009 26131 249 0.875 2.17875 Chlorophyta 3041 Plants Plants 75.5 1.2e-13   NR KAK2080949.1 3111 g25813 i0 52.3 5.14457831325301 65 29 75.9 1 19 207 202 266 KAK2080949.1 hypothetical protein QBZ16_000803 [Prototheca wickerhamii] diamond 1281 75.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
30067640 30067640 PRJNA1108009_P_NODE_22312_length_269_cov_1.178571_g21994_i0 PRJNA1108009 22312 269 1.178571 3.17035599 Bryopsis sp. KO-2 3115439 Plants Plants 117 1.8099999999999999e-28   NR GMH33391.1 3041901 g21994 i0 84.5 1.65055762081784 71 11 79.2 0 213 1 7 77 GMH33391.1 hypothetical protein BSKO_01225 [Bryopsis sp. KO-2023] diamond 444 117 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. KO-2023
30572975 30572975 PRJNA1108009_P_NODE_26933_length_248_cov_0.880000_g26615_i0 PRJNA1108009 26933 248 0.88 2.1824 Astrephomene gubernaculifera 47775 Plants Plants 54.3 1.07e-6   NR GFR40709.1 47775 g26615 i0 47.2 0.641129032258065 53 28 64.1 0 159 1 14 66 GFR40709.1 hypothetical protein Agub_g1315 [Astrephomene gubernaculifera] diamond 159 54.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Astrephomenaceae Astrephomene Astrephomene gubernaculifera
30825955 30825955 PRJNA1108009_P_NODE_17474_length_311_cov_2.512605_g17156_i0 PRJNA1108009 17474 311 2.512605 7.81420155 Pedinophyceae sp. YPF-7 765719 Plants Plants 73.2 4.42e-14   NR CAG9460866.1 765719 g17156 i0 56.4 0.752411575562701 78 31 75.2 1 310 77 1 75 CAG9460866.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 234 73.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
31892281 31892281 PRJNA1108009_P_NODE_19997_length_287_cov_2.345794_g19679_i0 PRJNA1108009 19997 287 2.345794 6.73242878 root 1 Root_unresolved Root_unresolved 65.1 1.68e-10   NR KAG2501458.1 47281 g19679 i0 59.6 1.29616724738676 47 18 48.1 1 176 39 23 69 KAG2501458.1 hypothetical protein HYH03_001238 [Edaphochlamys debaryana] diamond 372 65.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
32059168 32059168 PRJNA1108009_P_NODE_22038_length_271_cov_1.510101_g21720_i0 PRJNA1108009 22038 271 1.510101 4.09237371 Micractinium conductrix 554055 Plants Plants 49.3 2.7e-4   NR PSC69994.1 554055 g21720 i0 45.2 0.686346863468635 62 31 65.3 1 95 271 51 112 PSC69994.1 P-loop nucleoside triphosphate hydrolase superfamily [Micractinium conductrix] diamond 186 49.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix
32217479 32217479 PRJNA1108009_P_NODE_22378_length_268_cov_1.846154_g22060_i0 PRJNA1108009 22378 268 1.846154 4.94769272 Coccomyxa sp. Obi 2315456 Plants Plants 74.3 4e-13   NR BDA48776.1 2315456 g22060 i0 45 3.48134328358209 80 44 89.6 0 240 1 817 896 BDA48776.1 probable beta-Ala-His dipeptidase at C-terminar half [Coccomyxa sp. Obi] diamond 933 74.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
32249422 32249422 PRJNA1108009_P_NODE_10518_length_415_cov_1.576023_g10200_i0 PRJNA1108009 10518 415 1.576023 6.54049545 Chlamydomonas eustigma 1157962 Plants Plants 168 4.9e-50   NR GAX77325.1 1157962 g10200 i0 67.7 0.896385542168675 124 40 89.6 0 414 43 72 195 GAX77325.1 hypothetical protein CEUSTIGMA_g4771.t1 [Chlamydomonas eustigma] diamond 372 168 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;