RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

28 rows where bioproject = "PRJNA1108009", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 28 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 28 ✖

bioproject 1

  • PRJNA1108009 · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6591055 6591055 PRJNA1108009_P_NODE_21646_length_274_cov_3.009950_g21328_i0 PRJNA1108009 21646 274 3.00995 8.247263 Potamilus streckersoni 2493646 Mollusca Mollusca 129 1.02e-36   NR KAK3592046.1 2493646 g21328 i0 69.7 1.71897810218978 89 24 94.2 1 12 269 1 89 KAK3592046.1 hypothetical protein CHS0354_019301 [Potamilus streckersoni] diamond 471 129 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Unionida Unionidae Potamilus Potamilus streckersoni
15515721 15515721 PRJNA1108009_P_NODE_27933_length_246_cov_1.346821_g27615_i0 PRJNA1108009 27933 246 1.346821 3.31317966 Biomphalaria glabrata 6526 Mollusca Mollusca 95.5 3.35e-22   NR XP_055877737.1 6526 g27615 i0 65.7 2.41463414634146 67 23 81.7 0 2 202 150 216 XP_055877737.1 60S ribosomal protein L10 [Biomphalaria glabrata] diamond 594 95.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
16789991 16789991 PRJNA1108009_P_NODE_17994_length_306_cov_1.652361_g17676_i0 PRJNA1108009 17994 306 1.652361 5.05622466 Argopecten irradians 31199 Mollusca Mollusca 248 3.3899999999999995e-61   NTclustered gi|2835371159|ref|XM_069259847.1| 31199 g17676 i0 82.562 91.1601307189542 281 49 92 0 24 304 150 430 PREDICTED: Argopecten irradians actin, cytoplasmic-like (LOC138317873), mRNA blastn 27895 248 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
19338860 19338860 PRJNA1108009_P_NODE_23176_length_262_cov_1.317460_g22858_i0 PRJNA1108009 23176 262 1.31746 3.4517452 Mizuhopecten yessoensis 6573 Mollusca Mollusca 52.8 0.024   NTclustered gi|1207954058|ref|XM_021483806.1| 6573 g22858 i0 100 0.106870229007634 28 0 11 0 235 262 285 258 PREDICTED: Mizuhopecten yessoensis 60S ribosomal protein L44 (LOC110440639), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
21422469 21422469 PRJNA1108009_P_NODE_10997_length_404_cov_2.528701_g10679_i0 PRJNA1108009 10997 404 2.528701 10.21595204 Solemya velum 13268 Mollusca Mollusca 176 4.709999999999999e-54   NR KAL5014429.1 13268 g10679 i0 76.3 9.75742574257426 114 26 83.9 1 398 60 19 132 KAL5014429.1 hypothetical protein ScPMuIL_008699 [Solemya velum] diamond 3942 176 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Solemyida Solemyidae Solemya Solemya velum
23165460 23165460 PRJNA1108009_P_NODE_29979_length_243_cov_1.358824_g29661_i0 PRJNA1108009 29979 243 1.358824 3.30194232 Argopecten irradians 31199 Mollusca Mollusca 89.8 1.67e-13   NTclustered gi|2835348111|ref|XM_069246291.1| 31199 g29661 i0 89.855 1.16460905349794 69 7 28 0 160 228 469 537 PREDICTED: Argopecten irradians procathepsin L-like (LOC138305982), mRNA blastn 283 89.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
23165696 23165696 PRJNA1108009_P_NODE_9419_length_443_cov_1.881081_g9101_i0 PRJNA1108009 9419 443 1.881081 8.33318883 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 125 3.2500000000000004e-33   NR XP_052229778.1 45954 g9101 i0 51.4 4.11060948081264 144 69 96.8 1 13 441 1 144 XP_052229778.1 60S ribosomal protein L23a-like [Dreissena polymorpha] diamond 1821 125 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Dreissenidae Dreissena Dreissena polymorpha
24438949 24438949 PRJNA1108009_P_NODE_24440_length_252_cov_1.536313_g24122_i0 PRJNA1108009 24440 252 1.536313 3.87150876 Mollusca 6447 Mollusca Mollusca 124 4.87e-33   NR XP_062607410.1 36930 g24122 i0 74.7 9.77380952380952 83 21 98.8 0 250 2 25 107 XP_062607410.1 large ribosomal subunit protein uL10-like [Saccostrea cuccullata] diamond 2463 125 0.992 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea cuccullata
27406925 27406925 PRJNA1108009_P_NODE_23183_length_262_cov_1.222222_g22865_i0 PRJNA1108009 23183 262 1.222222 3.20222164 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 133 7.3299999999999985e-34   NR XP_033751008.1 6579 g22865 i0 85.5 13.1679389312977 76 11 87 0 33 260 1 76 XP_033751008.1 LOW QUALITY PROTEIN: translation elongation factor 2-like [Pecten maximus] diamond 3450 134 0.992537313432836 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
27668095 27668095 PRJNA1108009_P_NODE_17724_length_309_cov_1.275424_g17406_i0 PRJNA1108009 17724 309 1.275424 3.94106016 Pinctada imbricata 66713 Mollusca Mollusca 52 4.55e-5   NR KAK3104183.1 66713 g17406 i0 30.5 1.83495145631068 95 62 88.3 1 2 274 693 787 KAK3104183.1 hypothetical protein FSP39_025099 [Pinctada imbricata] diamond 567 52 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pterioida Pteriidae Pinctada Pinctada imbricata
27731421 27731421 PRJNA1108009_P_NODE_18304_length_303_cov_2.713043_g17986_i0 PRJNA1108009 18304 303 2.713043 8.22052029 Pomacea canaliculata 400727 Mollusca Mollusca 134 8.079999999999999e-38   NR XP_025086345.1 400727 g17986 i0 64.6 1.9009900990099 96 34 95 0 290 3 1 96 XP_025086345.1 LOW QUALITY PROTEIN: 40S ribosomal protein S11-like [Pomacea canaliculata] diamond 576 134 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata
27974975 27974975 PRJNA1108009_P_NODE_20565_length_283_cov_1.309524_g20247_i0 PRJNA1108009 20565 283 1.309524 3.70595292 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 111 4.95e-26   NR XP_048758658.2 37623 g20247 i0 61.4 6.68904593639576 88 34 93.3 0 2 265 379 466 XP_048758658.2 uncharacterized protein LOC125668487 [Ostrea edulis] diamond 1893 111 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Ostrea Ostrea edulis
28132981 28132981 PRJNA1108009_P_NODE_12965_length_369_cov_1.037162_g12647_i0 PRJNA1108009 12965 369 1.037162 3.82712778 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.7 2.38e-6   NR XP_069123020.1 31199 g12647 i0 61.1 0.878048780487805 54 17 40.7 1 364 215 105 158 XP_069123020.1 small ribosomal subunit protein eS24-like isoform X2 [Argopecten irradians] diamond 324 55.1 0.992740471869329 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
28236010 28236010 PRJNA1108009_P_NODE_10466_length_416_cov_1.973761_g10148_i0 PRJNA1108009 10466 416 1.973761 8.21084576 Physella acuta 109671 Mollusca Mollusca 81.3 1.58e-15   NR XP_059141807.1 109671 g10148 i0 52.5 1.70913461538462 59 28 42.5 0 33 209 191 249 XP_059141807.1 carboxypeptidase inhibitor SmCI-like [Physella acuta] diamond 711 81.3 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
28417197 28417197 PRJNA1108009_P_NODE_29286_length_244_cov_1.421053_g28968_i0 PRJNA1108009 29286 244 1.421053 3.46736932 Opisthokonta 33154 Mollusca Mollusca 120 7.61e-30   NR XP_005110847.2 6500 g28968 i0 69.1 39.7131147540984 81 24 99.6 1 1 243 469 548 XP_005110847.2 intraflagellar transport protein 56 [Aplysia californica] diamond 9690 121 0.991735537190083 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
29553467 29553467 PRJNA1108009_P_NODE_14910_length_341_cov_2.194030_g14592_i0 PRJNA1108009 14910 341 2.19403 7.4816423 Biomphalaria 6525 Mollusca Mollusca 86.7 1.58e-17   NR XP_055876679.1 6526 g14592 i0 39.8 1.90909090909091 108 62 93.3 3 3 320 213 319 XP_055876679.1 uncharacterized protein LOC106056006 [Biomphalaria glabrata] diamond 651 86.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
29941511 29941511 PRJNA1108009_P_NODE_5091_length_619_cov_1.357143_g4783_i0 PRJNA1108009 5091 619 1.357143 8.40071517 Elysia chlorotica 188477 Mollusca Mollusca 108 1.56e-25   NR RUS84494.1 188477 g4783 i0 34.2 0.949919224555735 196 121 91.1 4 53 616 5 200 RUS84494.1 hypothetical protein EGW08_007733 [Elysia chlorotica] diamond 588 108 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia chlorotica
30185297 30185297 PRJNA1108009_P_NODE_30632_length_242_cov_1.786982_g30314_i0 PRJNA1108009 30632 242 1.786982 4.32449644 Mollusca 6447 Mollusca Mollusca 99.8 1.73e-23   NR XP_005091519.1 6500 g30314 i0 69.7 7.5495867768595 66 19 81.8 1 37 234 7 71 XP_005091519.1 60S ribosomal protein L8 [Aplysia californica] diamond 1827 100 0.998 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
30312274 30312274 PRJNA1108009_P_NODE_21592_length_275_cov_1.158416_g21274_i0 PRJNA1108009 21592 275 1.158416 3.185644 Mollusca 6447 Mollusca Mollusca 53.5 9.17e-6   NR XP_033756295.1 6579 g21274 i0 65.5 1.47272727272727 29 10 31.6 0 52 138 3287 3315 XP_033756295.1 uncharacterized protein LOC117339040 [Pecten maximus] diamond 405 53.9 0.992578849721707 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Pecten Pecten maximus
30447033 30447033 PRJNA1108009_P_NODE_29673_length_244_cov_0.900585_g29355_i0 PRJNA1108009 29673 244 0.900585 2.1974274 Crassostrea ariakensis 3244846 Mollusca Mollusca 84.7 1.19e-17   NR AEK77456.1 94323 g29355 i0 65.5 2.70491803278689 55 19 67.6 0 2 166 198 252 AEK77456.1 elongation factor 1 alpha subunit 2, partial [Crassostrea ariakensis] diamond 660 84.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea ariakensis
30699505 30699505 PRJNA1108009_P_NODE_20014_length_287_cov_1.700935_g19696_i0 PRJNA1108009 20014 287 1.700935 4.88168345 Haliotis rubra 36100 Mollusca Mollusca 67.4 1.3e-10   NR XP_046551065.1 36100 g19696 i0 43.1 1.34843205574913 65 37 67.9 0 2 196 41 105 XP_046551065.1 ankyrin repeat domain-containing protein 50-like [Haliotis rubra] diamond 387 67.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rubra
30857500 30857500 PRJNA1108009_P_NODE_28134_length_246_cov_0.890173_g27816_i0 PRJNA1108009 28134 246 0.890173 2.18982558 Elysia chlorotica 188477 Mollusca Mollusca 49.7 1.4e-4   NR RUS89154.1 188477 g27816 i0 46.3 1.6219512195122 41 22 50 0 83 205 82 122 RUS89154.1 hypothetical protein EGW08_003097 [Elysia chlorotica] diamond 399 49.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia chlorotica
31006871 31006871 PRJNA1108009_P_NODE_27554_length_247_cov_0.885057_g27236_i0 PRJNA1108009 27554 247 0.885057 2.18609079 Metazoa 33208 Mollusca Mollusca 94.7 2.01e-20   NR XP_022332668.1 6565 g27236 i0 54.9 10.9554655870445 82 36 99.6 1 246 1 417 497 XP_022332668.1 protein transport protein Sec23A-like isoform X1 [Crassostrea virginica] diamond 2706 94.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Crassostrea Crassostrea virginica
31070242 31070242 PRJNA1108009_P_NODE_27355_length_247_cov_0.885057_g27037_i0 PRJNA1108009 27355 247 0.885057 2.18609079 Metazoa 33208 Mollusca Mollusca 52 2.02e-5   NR XP_034318848.2 29159 g27037 i0 38.1 4.66396761133603 63 38 75.3 1 186 1 74 136 XP_034318848.2 procathepsin L [Magallana gigas] diamond 1152 52 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
31363451 31363451 PRJNA1108009_P_NODE_26276_length_249_cov_0.875000_g25958_i0 PRJNA1108009 26276 249 0.875 2.17875 Elysia chlorotica 188477 Mollusca Mollusca 105 1.46e-25   NR RUS85969.1 188477 g25958 i0 62.3 2.78313253012048 77 29 92.8 0 234 4 36 112 RUS85969.1 hypothetical protein EGW08_006239, partial [Elysia chlorotica] diamond 693 105 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia chlorotica
32018857 32018857 PRJNA1108009_P_NODE_23418_length_260_cov_1.267380_g23100_i0 PRJNA1108009 23418 260 1.26738 3.295188 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 107 6.09e-25   NR GFR60827.1 1093978 g23100 i0 59.3 12.8423076923077 86 35 99.2 0 3 260 365 450 GFR60827.1 multidrug resistance-associated protein 7-like [Elysia marginata] diamond 3339 107 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia marginata
32059174 32059174 PRJNA1108009_P_NODE_26498_length_249_cov_0.875000_g26180_i0 PRJNA1108009 26498 249 0.875 2.17875 Physella acuta 109671 Mollusca Mollusca 73.6 5.52e-13   NR XP_059155897.1 109671 g26180 i0 42.1 0.91566265060241 76 44 91.6 0 236 9 546 621 XP_059155897.1 sphingomyelin phosphodiesterase-like [Physella acuta] diamond 228 73.6 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
32565751 32565751 PRJNA1108009_P_NODE_16299_length_325_cov_0.916667_g15981_i0 PRJNA1108009 16299 325 0.916667 2.97916775 Pomacea canaliculata 400727 Mollusca Mollusca 65.9 7.31e-10   NR XP_025105735.1 400727 g15981 i0 49.2 1.74461538461538 63 32 58.2 0 26 214 222 284 XP_025105735.1 calcium-binding protein LPS1-alpha-like [Pomacea canaliculata] diamond 567 65.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;