RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1108009", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA1108009 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15515498 15515498 PRJNA1108009_P_NODE_18453_length_302_cov_1.008734_g18135_i0 PRJNA1108009 18453 302 1.008734 3.04637668 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.008   NTclustered gi|2794943781|ref|XM_067872118.1| 2049356 g18135 i0 100 0.0960264900662252 29 0 10 0 1 29 1792 1764 Monocercomonoides exilis putative NEK protein kinase (MONOS_2210), partial mRNA blastn 29 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
28954022 28954022 PRJNA1108009_P_NODE_18568_length_301_cov_1.013158_g18250_i0 PRJNA1108009 18568 301 1.013158 3.04960558 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 119 9.15e-29   NR KAJ4460566.1 342808 g18250 i0 55.6 8.87043189368771 99 44 98.7 0 3 299 697 795 KAJ4460566.1 putative 60S ribosomal protein L4-B [Paratrimastix pyriformis] diamond 2670 119 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
29404553 29404553 PRJNA1108009_P_NODE_19449_length_292_cov_1.205479_g19131_i0 PRJNA1108009 19449 292 1.205479 3.51999868 Streblomastix strix 222440 Preaxostyla other_Eukaryota 67 1.97e-10   NR KAA6397115.1 222440 g19131 i0 50 2.95890410958904 66 28 67.8 2 210 13 2 62 KAA6397115.1 MAG: putative desumoylating isopeptidase 1 [Streblomastix strix] diamond 864 67 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;