RNAquarium Metadata Server
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contig_metadata

13 rows where bioproject = "PRJNA1108009" and tax_clade = "Haptista"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Haptista · 13 ✖

bioproject 1

  • PRJNA1108009 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1487613 1487613 PRJNA1108009_P_NODE_19902_length_288_cov_1.674419_g19584_i0 PRJNA1108009 19902 288 1.674419 4.82232672 Chlamydaster sterni 193542 Root_unresolved Root_unresolved 171 7.05e-38   NTclustered gi|33089907|gb|AY283744.1| 193542 g19584 i0 78.058 79.5034722222222 278 55 95 6 14 288 582 308 Chlamydaster sterni isolate Chlam30_2 actin mRNA, partial cds blastn 22897 171 1 Eukaryota Haptista     Centroplasthelida Pterocystida Pterocystidae Chlamydaster Chlamydaster sterni
11223933 11223933 PRJNA1108009_P_NODE_4329_length_671_cov_1.576923_g4023_i0 PRJNA1108009 4329 671 1.576923 10.58115333 Chrysotila carterae 13221 Haptophyta other_Eukaryota 193 4.53e-59   NR Q43362.1 13221 g4023 i0 72 1.40834575260805 157 44 70.2 0 155 625 8 164 Q43362.1 RecName: Full=V-type proton ATPase 16 kDa proteolipid subunit; Short=V-ATPase 16 kDa proteolipid subunit; AltName: Full=Vacuolar proton pump 16 kDa proteolipid subunit [Chrysotila carterae] diamond 945 193 1 Eukaryota Haptista   Haptophyta   Isochrysidales Isochrysidaceae Chrysotila Chrysotila carterae
11691699 11691699 PRJNA1108009_P_NODE_23010_length_263_cov_2.000000_g22692_i0 PRJNA1108009 23010 263 2 5.26 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 135 2.32e-27   NTclustered gi|551617584|ref|XM_005789563.1| 280463 g22692 i0 82.39 4.54372623574144 159 24 60 4 46 202 235 79 Emiliania huxleyi CCMP1516 hypothetical protein partial mRNA blastn 1195 135 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
14242131 14242131 PRJNA1108009_P_NODE_8012_length_485_cov_1.868932_g7695_i0 PRJNA1108009 8012 485 1.868932 9.0643202 Emiliania huxleyi CCMP1516 280463 Haptophyta other_Eukaryota 124 3.63e-33   NR XP_005765065.1 280463 g7695 i0 55.6 2.85154639175258 117 48 72.4 1 100 450 7 119 XP_005765065.1 hypothetical protein EMIHUDRAFT_416466 [Emiliania huxleyi CCMP1516] diamond 1383 124 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
20614272 20614272 PRJNA1108009_P_NODE_28697_length_245_cov_0.895349_g28379_i0 PRJNA1108009 28697 245 0.895349 2.19360505 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 202 2.08e-47   NTclustered gi|551591459|ref|XM_005779912.1| 280463 g28379 i0 85.864 0.779591836734694 191 25 78 2 3 192 1306 1495 Emiliania huxleyi CCMP1516 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase partial mRNA blastn 191 202 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
26837659 26837659 PRJNA1108009_P_NODE_18761_length_299_cov_1.022124_g18443_i0 PRJNA1108009 18761 299 1.022124 3.05615076 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 95.9 1.56e-20   NR KAL1499451.1 97485 g18443 i0 51 6.81270903010033 98 47 97.3 1 3 293 652 749 KAL1499451.1 hypothetical protein AB1Y20_011655 [Prymnesium parvum] diamond 2037 95.9 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
26869396 26869396 PRJNA1108009_P_NODE_28581_length_245_cov_1.779070_g28263_i0 PRJNA1108009 28581 245 1.77907 4.3587215 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.3 2.12e-6   NR XP_005782115.1 280463 g28263 i0 42.7 1.8 75 36 83.3 2 32 235 40 114 XP_005782115.1 hypothetical protein EMIHUDRAFT_233566 [Emiliania huxleyi CCMP1516] diamond 441 54.3 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
27383879 27383879 PRJNA1108009_P_NODE_13903_length_354_cov_1.782918_g13585_i0 PRJNA1108009 13903 354 1.782918 6.31152972 Pavlovales sp. CCMP2436 483367 Haptophyta other_Eukaryota 97.1 6.160000000000001e-22   NR KAJ1635632.1 483367 g13585 i0 51.4 0.923728813559322 109 53 92.4 0 330 4 7 115 KAJ1635632.1 ribosomal protein L30, ferredoxin-like fold domain-containing protein [Pavlovales sp. CCMP2436] diamond 327 97.1 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales     Pavlovales sp. CCMP2436
31204703 31204703 PRJNA1108009_P_NODE_28715_length_245_cov_0.895349_g28397_i0 PRJNA1108009 28715 245 0.895349 2.19360505 Prymnesium parvum 97485 Haptophyta other_Eukaryota 66.6 1.06e-11   NR KAL1515331.1 97485 g28397 i0 49.4 1.88571428571429 77 34 94.3 1 14 244 49 120 KAL1515331.1 hypothetical protein AB1Y20_001962 [Prymnesium parvum] diamond 462 66.6 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
31584874 31584874 PRJNA1108009_P_NODE_30576_length_243_cov_0.900000_g30258_i0 PRJNA1108009 30576 243 0.9 2.187 Diacronema lutheri 2081491 Haptophyta other_Eukaryota 89 1.98e-18   NR KAG8466765.1 2081491 g30258 i0 51.4 0.888888888888889 72 35 88.9 0 2 217 201 272 KAG8466765.1 hypothetical protein KFE25_008144 [Diacronema lutheri] diamond 216 89 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri
31837555 31837555 PRJNA1108009_P_NODE_18097_length_305_cov_1.762931_g17779_i0 PRJNA1108009 18097 305 1.762931 5.37693955 Emiliania huxleyi CCMP1516 280463 Haptophyta other_Eukaryota 86.3 2.43e-19   NR XP_005782836.1 280463 g17779 i0 52.7 0.914754098360656 93 40 90.5 2 29 304 20 109 XP_005782836.1 hypothetical protein EMIHUDRAFT_442529 [Emiliania huxleyi CCMP1516] diamond 279 86.3 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
32059172 32059172 PRJNA1108009_P_NODE_25658_length_250_cov_0.870056_g25340_i0 PRJNA1108009 25658 250 0.870056 2.17514 Prymnesium parvum 97485 Haptophyta other_Eukaryota 79.7 6.86e-16   NR KAL1508198.1 97485 g25340 i0 55.7 5.412 79 31 94.8 2 239 3 15 89 KAL1508198.1 hypothetical protein AB1Y20_004318 [Prymnesium parvum] diamond 1353 79.7 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
32534032 32534032 PRJNA1108009_P_NODE_29879_length_244_cov_0.900585_g29561_i0 PRJNA1108009 29879 244 0.900585 2.1974274 Chrysochromulina tobinii 1460289 Haptophyta other_Eukaryota 89 2.09e-18   NR KOO27102.1 1460289 g29561 i0 51.9 1.93032786885246 81 37 98.4 2 1 240 672 751 KOO27102.1 inositol monophosphatase [Chrysochromulina tobinii] diamond 471 89 1 Eukaryota Haptista   Haptophyta   Prymnesiales Chrysochromulinaceae Chrysochromulina Chrysochromulina tobinii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;