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contig_metadata

19 rows where bioproject = "PRJNA1108009" and tax_clade = "Bacteria candidate phyla"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 19 ✖

bioproject 1

  • PRJNA1108009 · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24439015 24439015 PRJNA1108009_P_NODE_27440_length_247_cov_0.885057_g27122_i0 PRJNA1108009 27440 247 0.885057 2.18609079 Candidatus Mycosynbacter amalyticus 2665156 Bacteria Bacteria 340 4.25e-89   NTclustered gi|1799615131|gb|CP045921.1| 2665156 g27122 i0 91.566 138.599190283401 249 17 100 4 1 247 220161 219915 Candidatus Mycosynbacter amalyticus isolate JR1 chromosome, complete genome blastn 34234 340 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota       Candidatus Mycosynbacter Candidatus Mycosynbacter amalyticus
27573239 27573239 PRJNA1108009_P_NODE_28224_length_246_cov_0.890173_g27906_i0 PRJNA1108009 28224 246 0.890173 2.18982558 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 84 3e-19   NR MBR5938954.1 2026720 g27906 i0 95.6 1.64634146341463 45 2 54.9 0 246 112 27 71 MBR5938954.1 50S ribosomal protein L20 [Candidatus Saccharibacteria bacterium] diamond 405 84 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27636520 27636520 PRJNA1108009_P_NODE_27604_length_247_cov_0.885057_g27286_i0 PRJNA1108009 27604 247 0.885057 2.18609079 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 125 7.2399999999999985e-34   NR MBQ3292955.1 2026720 g27286 i0 76.5 1.96761133603239 81 19 98.4 0 244 2 56 136 MBQ3292955.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 486 125 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27754206 27754206 PRJNA1108009_P_NODE_27664_length_247_cov_0.885057_g27346_i0 PRJNA1108009 27664 247 0.885057 2.18609079 Pseudomonadati 3379134 Bacteria Bacteria 100 2.55e-22   NR OGL71986.1 1802389 g27346 i0 60.3 3.86234817813765 78 31 94.7 0 1 234 460 537 OGL71986.1 MAG: hypothetical protein A3C17_01105 [Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_02_FULL_53_13] diamond 954 101 0.99009900990099 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_02_FULL_53_13
27857330 27857330 PRJNA1108009_P_NODE_25825_length_250_cov_0.870056_g25507_i0 PRJNA1108009 25825 250 0.870056 2.17514 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 73.9 2.35e-13   NR MBR3052036.1 2026720 g25507 i0 72.7 1.056 44 12 52.8 0 133 2 139 182 MBR3052036.1 thioredoxin-disulfide reductase [Candidatus Saccharibacteria bacterium] diamond 264 73.9 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28173041 28173041 PRJNA1108009_P_NODE_28726_length_245_cov_0.895349_g28408_i0 PRJNA1108009 28726 245 0.895349 2.19360505 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 130 7.28e-33   NR MBR2725846.1 2026720 g28408 i0 79 0.991836734693878 81 17 99.2 0 245 3 750 830 MBR2725846.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 243 130 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28638228 28638228 PRJNA1108009_P_NODE_23527_length_259_cov_1.586022_g23209_i0 PRJNA1108009 23527 259 1.586022 4.10779698 Bacteria 2 Bacteria Bacteria 42.7 0.0448   NR MBU4360837.1 2052139 g23209 i0 36.5 1.45945945945946 63 40 73 0 30 218 404 466 MBU4360837.1 preprotein translocase subunit SecA [Patescibacteria group bacterium] diamond 378 42.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30510009 30510009 PRJNA1108009_P_NODE_20433_length_284_cov_1.364929_g20115_i0 PRJNA1108009 20433 284 1.364929 3.87639836 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 147 2.73e-41   NR MBR2855556.1 2026720 g20115 i0 83.8 1.61619718309859 80 13 84.5 0 284 45 212 291 MBR2855556.1 NTP transferase domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 459 147 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30699508 30699508 PRJNA1108009_P_NODE_26314_length_249_cov_0.875000_g25996_i0 PRJNA1108009 26314 249 0.875 2.17875 Candidatus Nanosyncoccus alces 2171997 Bacteria Bacteria 159 9.59e-49   NR WP_129734361.1 2171997 g25996 i0 97.6 0.987951807228916 82 2 98.8 0 1 246 8 89 WP_129734361.1 30S ribosomal protein S14 [Candidatus Nanosyncoccus alces] diamond 246 159 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Nanosyncoccalia Candidatus Nanosyncoccales Candidatus Nanosyncoccaceae Candidatus Nanosyncoccus Candidatus Nanosyncoccus alces
30699513 30699513 PRJNA1108009_P_NODE_29234_length_245_cov_0.866279_g28916_i0 PRJNA1108009 29234 245 0.866279 2.12238355 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 130 4.74e-33   NR MBQ8156403.1 2026720 g28916 i0 80.2 3.96734693877551 81 15 99.2 1 1 243 566 645 MBQ8156403.1 sodium/proton-translocating pyrophosphatase [Candidatus Saccharibacteria bacterium] diamond 972 130 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30794317 30794317 PRJNA1108009_P_NODE_28494_length_246_cov_0.890173_g28176_i0 PRJNA1108009 28494 246 0.890173 2.18982558 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 134 2.73e-35   NR MBQ3433220.1 2026720 g28176 i0 79 11.8536585365854 81 17 98.8 0 2 244 161 241 MBQ3433220.1 sugar transferase [Candidatus Saccharibacteria bacterium] diamond 2916 134 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30975387 30975387 PRJNA1108009_P_NODE_13154_length_366_cov_1.139932_g12836_i0 PRJNA1108009 13154 366 1.139932 4.17215112 Bacteria 2 Bacteria Bacteria 89.7 1.3e-18   NR HEU67631.1 2053493 g12836 i0 46.9 1.87704918032787 113 56 91.8 3 30 365 12 121 HEU67631.1 HYR domain-containing protein [Candidatus Acetothermia bacterium] diamond 687 89.7 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Acetothermia bacterium
30984139 30984139 PRJNA1108009_P_NODE_24834_length_251_cov_0.865169_g24516_i0 PRJNA1108009 24834 251 0.865169 2.17157419 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 126 1.97e-32   NR MBQ9180838.1 2026720 g24516 i0 71.1 2.96414342629482 83 24 99.2 0 2 250 333 415 MBQ9180838.1 ATP-binding protein [Candidatus Saccharibacteria bacterium] diamond 744 126 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31173236 31173236 PRJNA1108009_P_NODE_30415_length_243_cov_0.905882_g30097_i0 PRJNA1108009 30415 243 0.905882 2.20129326 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 112 3.16e-28   NR MBR2710061.1 2026720 g30097 i0 72.5 0.987654320987654 80 22 98.8 0 241 2 16 95 MBR2710061.1 glycosyltransferase family 2 protein [Candidatus Saccharibacteria bacterium] diamond 240 112 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31458333 31458333 PRJNA1108009_P_NODE_30736_length_242_cov_0.911243_g30418_i0 PRJNA1108009 30736 242 0.911243 2.20520806 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 163 3.47e-46   NR MBQ1373367.1 2026720 g30418 i0 98.7 2.93801652892562 79 1 97.9 0 5 241 380 458 MBQ1373367.1 threonine--tRNA ligase [Candidatus Saccharibacteria bacterium] diamond 711 163 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31774385 31774385 PRJNA1108009_P_NODE_28057_length_246_cov_0.890173_g27739_i0 PRJNA1108009 28057 246 0.890173 2.18982558 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 142 6.62e-41   NR MBR3322130.1 2026720 g27739 i0 86.6 3 82 11 100 0 1 246 73 154 MBR3322130.1 elongation factor Ts [Candidatus Saccharibacteria bacterium] diamond 738 142 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32597081 32597081 PRJNA1108009_P_NODE_21460_length_276_cov_1.192118_g21142_i0 PRJNA1108009 21460 276 1.192118 3.29024568 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 179 2.78e-51   NR MBQ3474530.1 2026720 g21142 i0 93.4 6.92391304347826 91 6 98.9 0 3 275 419 509 MBQ3474530.1 threonine--tRNA ligase [Candidatus Saccharibacteria bacterium] diamond 1911 179 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32597089 32597089 PRJNA1108009_P_NODE_26300_length_249_cov_0.875000_g25982_i0 PRJNA1108009 26300 249 0.875 2.17875 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 118 1.0799999999999999e-32   NR MBO7720108.1 2026720 g25982 i0 90.5 0.759036144578313 63 6 75.9 0 190 2 1 63 MBO7720108.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 189 118 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32745811 32745811 PRJNA1108009_P_NODE_31380_length_241_cov_0.916667_g31062_i0 PRJNA1108009 31380 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 63.5 3.89e-11   NR PIX17685.1 1974545 g31062 i0 67.4 2.67634854771784 43 14 53.5 0 239 111 33 75 PIX17685.1 MAG: hypothetical protein COZ71_01995, partial [Candidatus Desantisbacteria bacterium CG_4_8_14_3_um_filter_40_12] diamond 645 63.5 1 Bacteria Bacteria candidate phyla   Candidatus Desantisiibacteriota         Candidatus Desantisbacteria bacterium CG_4_8_14_3_um_filter_40_12

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;