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contig_metadata

18 rows where bioproject = "PRJNA1105232" and tax_superkingdom = "Viruses"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Viruses · 18 ✖

bioproject 1

  • PRJNA1105232 · 18 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11691298 11691298 PRJNA1105232_S_NODE_5890_length_248_cov_3.969849_g5674_i0 PRJNA1105232 5890 248 3.969849 9.84522552 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.006   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g5674 i0 100 0.229838709677419 29 0 12 0 220 248 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
12966404 12966404 PRJNA1105232_S_NODE_12651_length_183_cov_1.014925_g12435_i0 PRJNA1105232 12651 183 1.014925 1.85731275 Zebrafish picornavirus 1 2304617 Viruses Viruses 250 5.15e-62   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g12435 i0 98.582 3.0655737704918 141 2 100 0 43 183 5635 5495 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 561 250 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
12966436 12966436 PRJNA1105232_S_NODE_2331_length_355_cov_89.588235_g2115_i0 PRJNA1105232 2331 355 89.588235 318.03823425 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.034   NTclustered gi|9964314|ref|NC_002520.1| 28321 g2115 i0 94.286 0.0985915492957746 35 1 10 1 107 140 153475 153509 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei
14241403 14241403 PRJNA1105232_S_NODE_18732_length_152_cov_3.145631_g18516_i0 PRJNA1105232 18732 152 3.145631 4.78135912 Erythrocytic necrosis virus 1543320 Viruses Viruses 121 3.36e-23   NTclustered gi|1624806695|gb|MK638714.1| 1543320 g18516 i0 92.857 46.0986842105263 84 4 54 1 2 83 242 325 Erythrocytic necrosis virus isolate SEQ_9 putative RNA-dependent DNA polymerase mRNA, complete cds blastn 7007 121 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
15515221 15515221 PRJNA1105232_S_NODE_3313_length_311_cov_2.557252_g3097_i0 PRJNA1105232 3313 311 2.557252 7.95305372 Mimivirus LCMiAC 2506608 Viruses Viruses 163 1.13e-46   NR QBK88431.1 2506608 g3097 i0 71.8 0.993569131832797 103 29 99.4 0 310 2 237 339 QBK88431.1 MAG: GDP-mannose 4,6 dehydratase [Mimivirus LCMiAC01] diamond 309 163 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Mimivirus LCMiAC01
18064233 18064233 PRJNA1105232_S_NODE_11655_length_189_cov_1.857143_g11439_i0 PRJNA1105232 11655 189 1.857143 3.51000027 Pestivirus bovis 3052619 Viruses Viruses 331 1.86e-86   NTclustered gi|2858850717|gb|PQ613792.1| 11099 g11439 i0 98.404 99.9259259259259 188 3 99 0 1 188 8781 8594 Bovine viral diarrhea virus 1 isolate USMARC/PI-91-21/MDBK polyprotein gene, complete cds blastn 18886 331 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Pestivirus Pestivirus bovis
19338412 19338412 PRJNA1105232_S_NODE_1576_length_410_cov_48.667590_g1361_i0 PRJNA1105232 1576 410 48.66759 199.537119 Zebrafish picornavirus 1 2304617 Viruses Viruses 712 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g1361 i0 98.049 4.26341463414634 410 7 100 1 1 410 8221 7813 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 1748 712 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
24438473 24438473 PRJNA1105232_S_NODE_10260_length_199_cov_25.033333_g10044_i0 PRJNA1105232 10260 199 25.033333 49.81633267 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.005   NTclustered gi|1995060321|gb|MN450069.1| 12164 g10044 i0 100 0.728643216080402 29 0 15 0 171 199 41 13 Carnation latent virus isolate KL, complete genome blastn 145 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
24438479 24438479 PRJNA1105232_S_NODE_12320_length_185_cov_0.860294_g12104_i0 PRJNA1105232 12320 185 0.860294 1.5915439 Jujube closterovirus 1 3043313 Viruses Viruses 56.5 0.001   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g12104 i0 100 0.313513513513514 30 0 16 0 1 30 6 35 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
27036074 27036074 PRJNA1105232_S_NODE_10602_length_197_cov_1.405405_g10386_i0 PRJNA1105232 10602 197 1.405405 2.76864785 Fadolivirus algeromassiliense 3060017 Viruses Viruses 73.2 2.5e-13   NR YP_010803631.1 3060017 g10386 i0 60 1.6751269035533 55 22 83.8 0 31 195 222 276 YP_010803631.1 thioredoxin-disulfide reductase [Fadolivirus algeromassiliense] diamond 330 73.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
27668087 27668087 PRJNA1105232_S_NODE_14584_length_172_cov_1.219512_g14368_i0 PRJNA1105232 14584 172 1.219512 2.09756064 Clandestinovirus 2831644 Viruses Viruses 48.5 1.16e-4   NR QYA18833.1 2831644 g14368 i0 43.6 0.959302325581395 55 31 95.9 0 6 170 173 227 QYA18833.1 hypothetical protein KOM_12_565 [Clandestinovirus] diamond 165 48.5 1 Viruses               Clandestinovirus
28267679 28267679 PRJNA1105232_S_NODE_9866_length_203_cov_1.688312_g9650_i0 PRJNA1105232 9866 203 1.688312 3.42727336 Mimivirus LCMiAC 2506608 Viruses Viruses 94.7 3.94e-21   NR QBK88431.1 2506608 g9650 i0 59.7 0.990147783251232 67 27 99 0 1 201 267 333 QBK88431.1 MAG: GDP-mannose 4,6 dehydratase [Mimivirus LCMiAC01] diamond 201 94.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Mimivirus LCMiAC01
28804372 28804372 PRJNA1105232_S_NODE_13968_length_175_cov_1.452381_g13752_i0 PRJNA1105232 13968 175 1.452381 2.54166675 Hyperionvirus sp. 2487770 Viruses Viruses 67.4 1.83e-11   NR AYV83828.1 2487770 g13752 i0 57.4 0.805714285714286 47 20 80.6 0 153 13 221 267 AYV83828.1 MAG: putative ubiquitin carboxyl-terminal hydrolase 2 isoform X1 [Hyperionvirus sp.] diamond 141 67.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Hyperionvirus sp.
28867725 28867725 PRJNA1105232_S_NODE_15848_length_167_cov_0.881356_g15632_i0 PRJNA1105232 15848 167 0.881356 1.47186452 Pimephales minnow adintovirus 2609864 Viruses Viruses 58.2 2.82e-8   NR DAC81394.1 2609864 g15632 i0 69.4 0.646706586826347 36 11 64.7 0 110 3 7 42 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 108 58.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
29751568 29751568 PRJNA1105232_S_NODE_10871_length_195_cov_1.068493_g10655_i0 PRJNA1105232 10871 195 1.068493 2.08356135 Hyperionvirus sp. 2487770 Viruses Viruses 68.6 1.74e-12   NR AYV82866.1 2487770 g10655 i0 52.6 0.876923076923077 57 27 87.7 0 172 2 6 62 AYV82866.1 MAG: homeobox protein 4 [Hyperionvirus sp.] diamond 171 68.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Hyperionvirus sp.
31047454 31047454 PRJNA1105232_S_NODE_935_length_498_cov_1.815145_g723_i0 PRJNA1105232 935 498 1.815145 9.0394221 Kaumoebavirus 1859492 Viruses Viruses 84 2.12e-15   NR YP_009352567.1 1859492 g723 i0 44.2 1.24096385542169 104 54 60.8 3 496 194 393 495 YP_009352567.1 Peroxinectin [Kaumoebavirus] diamond 618 84 1 Viruses               Kaumoebavirus
31869281 31869281 PRJNA1105232_S_NODE_12917_length_181_cov_2.053030_g12701_i0 PRJNA1105232 12917 181 2.05303 3.7159843 Adintovirus anguilla10665 3115889 Viruses Viruses 63.9 6.96e-11   NR DBA49781.1 3115889 g12701 i0 62.2 0.74585635359116 45 17 74.6 0 171 37 7 51 DBA49781.1 MAG TPA_asm: Cupiennin [Adintovirus anguilla10665] diamond 135 63.9 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus anguilla10665
31892280 31892280 PRJNA1105232_S_NODE_7797_length_222_cov_3.606936_g7581_i0 PRJNA1105232 7797 222 3.606936 8.00739792 Salarius guttatus piscichuvirus 2951531 Viruses Viruses 59.7 3e-8   NR QHX39772.1 2951531 g7581 i0 44.6 2 74 39 97.3 1 221 6 6 79 QHX39772.1 RNA-dependent RNA polymerase [Herr Frank virus 1] diamond 444 59.7 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus Salarius guttatus piscichuvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;