RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1105232", tax_phylum = "Preplasmiviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Preplasmiviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1105232 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28867725 28867725 PRJNA1105232_S_NODE_15848_length_167_cov_0.881356_g15632_i0 PRJNA1105232 15848 167 0.881356 1.47186452 Pimephales minnow adintovirus 2609864 Viruses Viruses 58.2 2.82e-8   NR DAC81394.1 2609864 g15632 i0 69.4 0.646706586826347 36 11 64.7 0 110 3 7 42 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 108 58.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
31869281 31869281 PRJNA1105232_S_NODE_12917_length_181_cov_2.053030_g12701_i0 PRJNA1105232 12917 181 2.05303 3.7159843 Adintovirus anguilla10665 3115889 Viruses Viruses 63.9 6.96e-11   NR DBA49781.1 3115889 g12701 i0 62.2 0.74585635359116 45 17 74.6 0 171 37 7 51 DBA49781.1 MAG TPA_asm: Cupiennin [Adintovirus anguilla10665] diamond 135 63.9 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus anguilla10665

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;