RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

41 rows where bioproject = "PRJNA1105232" and tax_phylum = "Nematoda"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 41 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1105232 · 41 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
212579 212579 PRJNA1105232_S_NODE_4961_length_266_cov_1.299539_g4745_i0 PRJNA1105232 4961 266 1.299539 3.45677374 Mesorhabditis belari 2138241 Nematoda Nematoda 90.5 1.43e-20   NR CAJ0963925.1 2138241 g4745 i0 83.3 3.23684210526316 48 8 54.1 0 2 145 125 172 CAJ0963925.1 unnamed protein product, partial [Mesorhabditis belari] diamond 861 90.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
212602 212602 PRJNA1105232_S_NODE_8101_length_219_cov_1.835294_g7885_i0 PRJNA1105232 8101 219 1.835294 4.01929386 Caenorhabditis elegans 6239 Nematoda Nematoda 405 1.29e-108   NTclustered gi|1879207294|gb|MT797802.1| 6239 g7885 i0 100 91.2557077625571 219 0 100 0 1 219 226 8 Caenorhabditis elegans isolate KZN large subunit ribosomal RNA gene, partial sequence blastn 19985 405 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
1487275 1487275 PRJNA1105232_S_NODE_3942_length_291_cov_2.066116_g3726_i0 PRJNA1105232 3942 291 2.066116 6.01239756 Caenorhabditis elegans 6239 Nematoda Nematoda 538 1.6999999999999994e-148   NTclustered gi|413006566|emb|Z92784.2| 6239 g3726 i0 100 95.127147766323 291 0 100 0 1 291 28198 28488 Caenorhabditis elegans Cosmid F31C3, complete sequence blastn 27682 538 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
2763265 2763265 PRJNA1105232_S_NODE_12823_length_182_cov_1.172932_g12607_i0 PRJNA1105232 12823 182 1.172932 2.13473624 Caenorhabditis elegans 6239 Nematoda Nematoda 337 3.82e-88   NTclustered gi|1972310597|ref|NM_077585.9| 6239 g12607 i0 100 2.92307692307692 182 0 100 0 1 182 408 227 Caenorhabditis elegans Conserved secreted protein (Y62H9A.5), mRNA blastn 532 337 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
4039385 4039385 PRJNA1105232_S_NODE_8124_length_219_cov_1.223529_g7908_i0 PRJNA1105232 8124 219 1.223529 2.67952851 Caenorhabditis elegans 6239 Nematoda Nematoda 405 1.29e-108   NTclustered gi|687866128|emb|LK928185.1| 6239 g7908 i0 100 4.36986301369863 219 0 100 0 1 219 17281 17499 Caenorhabditis elegans genome assembly C_elegans_Bristol_N2_v1_5_4 ,scaffold CELN2_scaffold0000527 blastn 957 405 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
5315503 5315503 PRJNA1105232_S_NODE_9785_length_204_cov_1.341935_g9569_i0 PRJNA1105232 9785 204 1.341935 2.7375474 Caenorhabditis elegans 6239 Nematoda Nematoda 377 2.59e-100   NTclustered gi|1972266499|ref|NM_171316.9| 6239 g9569 i0 100 12.2647058823529 204 0 100 0 1 204 557 760 Caenorhabditis elegans Large ribosomal subunit protein eL8 (rpl-7A), mRNA blastn 2502 377 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
6123448 6123448 PRJNA1105232_S_NODE_4365_length_279_cov_4.704348_g4149_i0 PRJNA1105232 4365 279 4.704348 13.12513092 Caenorhabditis 6237 Nematoda Nematoda 516 7.58e-142   NTclustered gi|1279388950|gb|MG551689.1| 6239 g4149 i0 100 100.358422939068 279 0 100 0 1 279 330 52 Caenorhabditis elegans isolate C.eleg_AM151 small subunit ribosomal RNA gene, partial sequence blastn 28000 516 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
6590646 6590646 PRJNA1105232_S_NODE_11986_length_187_cov_1.231884_g11770_i0 PRJNA1105232 11986 187 1.231884 2.30362308 Caenorhabditis elegans 6239 Nematoda Nematoda 346 6.56e-91   NTclustered gi|3217349|emb|Z81068.1| 6239 g11770 i0 100 11.475935828877 187 0 100 0 1 187 11638 11824 Caenorhabditis elegans Cosmid F25H5, complete sequence blastn 2146 346 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
6590685 6590685 PRJNA1105232_S_NODE_4386_length_279_cov_1.834783_g4170_i0 PRJNA1105232 4386 279 1.834783 5.11904457 Strongyloides papillosus 174720 Nematoda Nematoda 174 5.26e-39   NTclustered gi|690018585|emb|LM525823.1| 174720 g4170 i0 79.377 7.87096774193548 257 46 90 6 3 254 34608 34862 Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0000205 blastn 2196 174 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides papillosus
6590694 6590694 PRJNA1105232_S_NODE_5566_length_254_cov_2.156098_g5350_i0 PRJNA1105232 5566 254 2.156098 5.47648892 Caenorhabditis elegans 6239 Nematoda Nematoda 464 2.4999999999999994e-126   NTclustered gi|1845975117|ref|NM_067641.8| 6239 g5350 i0 100 3.65354330708661 251 0 99 0 4 254 663 413 Caenorhabditis elegans Secreted protein (perm-2), mRNA blastn 928 464 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
7865283 7865283 PRJNA1105232_S_NODE_12307_length_185_cov_1.147059_g12091_i0 PRJNA1105232 12307 185 1.147059 2.12205915 Caenorhabditis elegans 6239 Nematoda Nematoda 342 8.369999999999999e-90   NTclustered gi|1972266638|ref|NM_068494.9| 6239 g12091 i0 100 58.6 185 0 100 0 1 185 259 75 Caenorhabditis elegans Small ribosomal subunit protein eS25 (rps-25), mRNA blastn 10841 342 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
7865357 7865357 PRJNA1105232_S_NODE_8927_length_211_cov_2.493827_g8711_i0 PRJNA1105232 8927 211 2.493827 5.26197497 Oigolaimella attenuata 669116 Nematoda Nematoda 200 6.25e-47   NTclustered gi|256709322|gb|GQ422336.1| 669116 g8711 i0 83.886 38.3364928909953 211 32 99 2 2 211 329 120 Oigolaimella attenuata large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds blastn 8089 200 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Diplogasteridae Oigolaimella Oigolaimella attenuata
8673613 8673613 PRJNA1105232_S_NODE_14987_length_170_cov_1.289256_g14771_i0 PRJNA1105232 14987 170 1.289256 2.1917352 Caenorhabditis 6237 Nematoda Nematoda 315 1.64e-81   NTclustered gi|413006566|emb|Z92784.2| 6239 g14771 i0 100 68.1058823529412 170 0 100 0 1 170 28091 27922 Caenorhabditis elegans Cosmid F31C3, complete sequence blastn 11578 315 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
9140160 9140160 PRJNA1105232_S_NODE_1248_length_449_cov_1.532500_g1034_i0 PRJNA1105232 1248 449 1.5325 6.880925 Caenorhabditis elegans 6239 Nematoda Nematoda 819 0   NTclustered gi|1879207294|gb|MT797802.1| 6239 g1034 i0 99.555 96.0556792873051 449 2 100 0 1 449 765 317 Caenorhabditis elegans isolate KZN large subunit ribosomal RNA gene, partial sequence blastn 43129 819 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
10415998 10415998 PRJNA1105232_S_NODE_13989_length_175_cov_1.238095_g13773_i0 PRJNA1105232 13989 175 1.238095 2.16666625 Caenorhabditis elegans 6239 Nematoda Nematoda 324 2.83e-84   NTclustered gi|1972251482|ref|NM_063410.7| 6239 g13773 i0 100 3 175 0 100 0 1 175 830 656 Caenorhabditis elegans Large ribosomal subunit protein uL18 (rpl-5), mRNA blastn 525 324 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
10416037 10416037 PRJNA1105232_S_NODE_4329_length_280_cov_2.398268_g4113_i0 PRJNA1105232 4329 280 2.398268 6.7151504 Pristionchus sp. 10 RS5133 452805 Nematoda Nematoda 235 2.3899999999999997e-57   NTclustered gi|150984485|gb|EF634885.1| 452805 g4113 i0 81.786 21.2821428571429 280 51 100 0 1 280 149 428 Pristionchus sp. 10 RS5133 small subunit ribosomal protein 14 (rps-14) mRNA, partial cds blastn 5959 235 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus sp. 10 RS5133
12966425 12966425 PRJNA1105232_S_NODE_16411_length_165_cov_0.896552_g16195_i0 PRJNA1105232 16411 165 0.896552 1.4793108 Caenorhabditis elegans 6239 Nematoda Nematoda 305 9.59e-79   NTclustered gi|27543056|gb|AY171200.1| 6239 g16195 i0 100 30.7515151515152 165 0 100 0 1 165 149 313 Caenorhabditis elegans isolate CB4857 cytochrome oxidase subunit III (COIII) gene, partial cds; tRNA-Thr gene, complete sequence; NADH dehydrogenase subunit 4 (ND4) and cytochrome oxidase subunit I (COI) genes, complete cds; tRNA-Cys, tRNA-Met, tRNA-Asp, and tRNA-Gly genes, complete sequence; cytochrome oxidase subunit II (COII) gene, complete cds; tRNA-His gene, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial genes for mitochondrial products blastn 5074 305 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
12966428 12966428 PRJNA1105232_S_NODE_16951_length_163_cov_1.368421_g16735_i0 PRJNA1105232 16951 163 1.368421 2.23052623 Caenorhabditis elegans 6239 Nematoda Nematoda 302 1.22e-77   NTclustered gi|1972229135|ref|NM_059244.7| 6239 g16735 i0 100 3.84049079754601 163 0 100 0 1 163 661 823 Caenorhabditis elegans CSD domain-containing protein (cey-2), mRNA blastn 626 302 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
12966454 12966454 PRJNA1105232_S_NODE_7111_length_231_cov_1.142857_g6895_i0 PRJNA1105232 7111 231 1.142857 2.63999967 Caenorhabditis elegans 6239 Nematoda Nematoda 427 2.9399999999999998e-115   NTclustered gi|27543091|gb|AY171207.1| 6239 g6895 i0 100 98.5497835497836 231 0 100 0 1 231 4232 4002 Caenorhabditis elegans isolate TR403 cytochrome oxidase subunit III (COIII) gene, partial cds; tRNA-Thr gene, complete sequence; NADH dehydrogenase subunit 4 (ND4) and cytochrome oxidase subunit I (COI) genes, complete cds; tRNA-Cys, tRNA-Met, tRNA-Asp, and tRNA-Gly genes, complete sequence; cytochrome oxidase subunit II (COII) gene, complete cds; tRNA-His gene, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial genes for mitochondrial products blastn 22765 427 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
14241429 14241429 PRJNA1105232_S_NODE_5612_length_253_cov_3.504902_g5396_i0 PRJNA1105232 5612 253 3.504902 8.86740206 Caenorhabditis elegans 6239 Nematoda Nematoda 468 1.92e-127   NTclustered gi|5834884|ref|NC_001328.1| 6239 g5396 i0 100 94.4466403162055 253 0 100 0 1 253 2899 3151 Caenorhabditis elegans mitochondrion, complete genome blastn 23895 468 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
15515210 15515210 PRJNA1105232_S_NODE_1833_length_387_cov_5.798817_g1617_i0 PRJNA1105232 1833 387 5.798817 22.44142179 Trichinella 6333 Nematoda Nematoda 151 6.24e-44   NR KAL1284361.1 6337 g1617 i0 56.7 10.2015503875969 120 51 92.2 1 26 382 38 157 KAL1284361.1 Eukaryotic translation initiation factor [Trichinella pseudospiralis] diamond 3948 151 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella pseudospiralis
15515215 15515215 PRJNA1105232_S_NODE_2233_length_361_cov_1.823718_g2017_i0 PRJNA1105232 2233 361 1.823718 6.58362198 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 181 1.01e-51   NR NP_498263.2 6239 g2017 i0 81.9 4.38781163434903 105 19 87.3 0 359 45 426 530 NP_498263.2 Putative aldehyde dehydrogenase family 7 member A1 homolog [Caenorhabditis elegans] diamond 1584 181 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
15515233 15515233 PRJNA1105232_S_NODE_6353_length_241_cov_2.119792_g6137_i0 PRJNA1105232 6353 241 2.119792 5.10869872 Caenorhabditis elegans 6239 Nematoda Nematoda 399 6.729999999999998e-107   NTclustered gi|351059636|emb|FO080852.1| 6239 g6137 i0 100 5.35269709543568 216 0 90 0 1 216 21131 21346 Caenorhabditis elegans Cosmid C44B12, complete sequence blastn 1290 399 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
18871989 18871989 PRJNA1105232_S_NODE_2695_length_336_cov_15.261324_g2479_i0 PRJNA1105232 2695 336 15.261324 51.27804864 Caenorhabditis 6237 Nematoda Nematoda 616 8.96e-172   NTclustered gi|25167357|ref|NR_000053.1| 6239 g2479 i0 99.703 100.684523809524 337 0 100 1 1 336 914 578 Caenorhabditis elegans 18S ribosomal RNA (rrn-1.1), rRNA blastn 33830 616 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
19338411 19338411 PRJNA1105232_S_NODE_15736_length_167_cov_1.669492_g15520_i0 PRJNA1105232 15736 167 1.669492 2.78805164 Caenorhabditis elegans 6239 Nematoda Nematoda 309 7.53e-80   NTclustered gi|1831509098|ref|NM_063983.6| 6239 g15520 i0 100 7.62874251497006 167 0 100 0 1 167 288 454 Caenorhabditis elegans Small ribosomal subunit protein uS4 (rps-9), mRNA blastn 1274 309 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
19338445 19338445 PRJNA1105232_S_NODE_5196_length_261_cov_2.202830_g4980_i0 PRJNA1105232 5196 261 2.20283 5.7493863 Caenorhabditis elegans 6239 Nematoda Nematoda 483 7.12e-132   NTclustered gi|152003245|emb|Z77659.2| 6239 g4980 i0 100 5.86590038314176 261 0 100 0 1 261 24953 25213 Caenorhabditis elegans Cosmid F23B12, complete sequence blastn 1531 483 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
20613714 20613714 PRJNA1105232_S_NODE_13137_length_180_cov_1.190840_g12921_i0 PRJNA1105232 13137 180 1.19084 2.143512 Pratylenchus vulnus 45931 Nematoda Nematoda 52.8 0.015   NTclustered gi|1557394408|emb|LR031564.1| 45931 g12921 i0 100 0.155555555555556 28 0 16 0 1 28 23 50 Pratylenchus vulnus mRNA for endoglucanase-8 (Pv-eng-8 gene), clone Pv-eng-8-10 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Pratylenchidae Pratylenchus Pratylenchus vulnus
21889380 21889380 PRJNA1105232_S_NODE_16978_length_163_cov_1.368421_g16762_i0 PRJNA1105232 16978 163 1.368421 2.23052623 Caenorhabditis elegans 6239 Nematoda Nematoda 302 1.22e-77   NTclustered gi|27543236|gb|AY171138.1| 6239 g16762 i0 100 99.8282208588957 163 0 100 0 1 163 934 1096 Caenorhabditis elegans isolate CB4855 NADH dehydrogenase subunit 6 (ND6) gene, partial cds; NADH dehydrogenase subunit 4L (ND4L) gene, complete cds; tRNA-Trp and tRNA-Glu genes, complete sequence; 12S ribosomal RNA gene, complete sequence; tRNA-Ser, tRNA-Asn, and tRNA-Tyr genes, complete sequence; and NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial genes for mitochondrial products blastn 16272 302 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
21889413 21889413 PRJNA1105232_S_NODE_5238_length_260_cov_1.260664_g5022_i0 PRJNA1105232 5238 260 1.260664 3.2777264 Caenorhabditis elegans 6239 Nematoda Nematoda 481 2.55e-131   NTclustered gi|1972267516|ref|NM_070141.10| 6239 g5022 i0 100 12.5038461538462 260 0 100 0 1 260 547 288 Caenorhabditis elegans Large ribosomal subunit protein uL11 (rpl-12), mRNA blastn 3251 481 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
21889430 21889430 PRJNA1105232_S_NODE_9718_length_204_cov_2.683871_g9502_i0 PRJNA1105232 9718 204 2.683871 5.47509684 Caenorhabditis briggsae 6238 Nematoda Nematoda 141 3.69e-29   NTclustered gi|2158428434|ref|XM_002640590.2| 6238 g9502 i0 81.871 8.75490196078431 171 27 83 4 1 169 313 145 Caenorhabditis briggsae Protein CBR-RPS-20 (Cbr-rps-20), partial mRNA blastn 1786 141 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
23164848 23164848 PRJNA1105232_S_NODE_14359_length_173_cov_1.258065_g14143_i0 PRJNA1105232 14359 173 1.258065 2.17645245 Caenorhabditis elegans 6239 Nematoda Nematoda 320 3.61e-83   NTclustered gi|373219572|emb|FO081068.1| 6239 g14143 i0 100 3 173 0 100 0 1 173 11339 11511 Caenorhabditis elegans Cosmid F02E8, complete sequence blastn 519 320 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
24438483 24438483 PRJNA1105232_S_NODE_12640_length_183_cov_1.164179_g12424_i0 PRJNA1105232 12640 183 1.164179 2.13044757 Caenorhabditis elegans 6239 Nematoda Nematoda 339 1.07e-88   NTclustered gi|1972242989|ref|NM_062531.8| 6239 g12424 i0 100 13.1967213114754 183 0 100 0 1 183 333 151 Caenorhabditis elegans Large ribosomal subunit protein eL22 (rpl-22), mRNA blastn 2415 339 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
24438537 24438537 PRJNA1105232_S_NODE_9420_length_207_cov_1.082278_g9204_i0 PRJNA1105232 9420 207 1.082278 2.24031546 Caenorhabditis elegans 6239 Nematoda Nematoda 372 1.2199999999999997e-98   NTclustered gi|1972289026|ref|NM_072430.4| 6239 g9204 i0 99.034 2.59420289855072 207 2 100 0 1 207 225 431 Caenorhabditis elegans KxDL domain-containing protein (kxd-1), mRNA blastn 537 372 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
27596239 27596239 PRJNA1105232_S_NODE_13944_length_175_cov_1.682540_g13728_i0 PRJNA1105232 13944 175 1.68254 2.944445 Metazoa 33208 Nematoda Nematoda 89.4 5.74e-19   NR GMR41334.1 1317129 g13728 i0 70.7 11.9142857142857 58 17 99.4 0 174 1 425 482 GMR41334.1 hypothetical protein PMAYCL1PPCAC_11529, partial [Pristionchus mayeri] diamond 2085 90.1 0.992230854605993 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus mayeri
27699846 27699846 PRJNA1105232_S_NODE_1544_length_413_cov_2.571429_g1329_i0 PRJNA1105232 1544 413 2.571429 10.62000177 Trichuris suis 68888 Nematoda Nematoda 61.2 7.27e-8   NR KHJ42158.1 68888 g1329 i0 29.9 5.94188861985472 134 86 91.5 2 383 6 126 259 KHJ42158.1 Filamin/ABP280 repeat protein [Trichuris suis] diamond 2454 61.2 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris suis
27825926 27825926 PRJNA1105232_S_NODE_15604_length_168_cov_0.873950_g15388_i0 PRJNA1105232 15604 168 0.87395 1.468236 Trichinella papuae 268474 Nematoda Nematoda 77.4 7.71e-15   NR KRZ77476.1 268474 g15388 i0 68.9 12.8571428571429 45 14 80.4 0 1 135 398 442 KRZ77476.1 Cysteine desulfurase, mitochondrial [Trichinella papuae] diamond 2160 77.4 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella papuae
29901156 29901156 PRJNA1105232_S_NODE_15711_length_167_cov_1.940678_g15495_i0 PRJNA1105232 15711 167 1.940678 3.24093226 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 44.3 0.00385   NR VBB27759.1 6277 g15495 i0 39.2 3.53892215568862 51 31 91.6 0 155 3 724 774 VBB27759.1 unnamed protein product [Acanthocheilonema viteae] diamond 591 44.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Acanthocheilonema Acanthocheilonema viteae
31173223 31173223 PRJNA1105232_S_NODE_16675_length_164_cov_1.313043_g16459_i0 PRJNA1105232 16675 164 1.313043 2.15339052 Bursaphelenchus okinawaensis 465554 Nematoda Nematoda 72.4 4.38e-13   NR CAD5229356.1 465554 g16459 i0 54.7 2.90853658536585 53 24 97 0 1 159 169 221 CAD5229356.1 unnamed protein product [Bursaphelenchus okinawaensis] diamond 477 72.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus okinawaensis
31544465 31544465 PRJNA1105232_S_NODE_6676_length_237_cov_1.106383_g6460_i0 PRJNA1105232 6676 237 1.106383 2.62212771 Rhabditida 6236 Nematoda Nematoda 103 1.05e-24   NR BAB63947.1 6239 g6460 i0 62.8 9.87341772151899 78 29 98.7 0 236 3 196 273 BAB63947.1 Ser/Thr protein phosphatase [Caenorhabditis elegans] diamond 2340 103 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
31955439 31955439 PRJNA1105232_S_NODE_11957_length_187_cov_1.659420_g11741_i0 PRJNA1105232 11957 187 1.65942 3.1031154 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 75.1 6.99e-14   NR MFH4974294.1 75299 g11741 i0 48.4 5.90374331550802 62 32 99.5 0 187 2 793 854 MFH4974294.1 hypothetical protein [Gnathostoma spinigerum] diamond 1104 75.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Gnathostomatidae Gnathostoma Gnathostoma spinigerum
32439164 32439164 PRJNA1105232_S_NODE_11419_length_191_cov_1.098592_g11203_i0 PRJNA1105232 11419 191 1.098592 2.09831072 Soboliphyme baturini 241478 Nematoda Nematoda 48.9 1.25e-4   NR VDO95965.1 241478 g11203 i0 58.3 2.76439790575916 36 15 56.5 0 145 38 510 545 VDO95965.1 unnamed protein product [Soboliphyme baturini] diamond 528 48.9 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Dioctophymatida Soboliphymatidae Soboliphyme Soboliphyme baturini

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;