RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1105232" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1105232 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27604964 27604964 PRJNA1105232_S_NODE_6424_length_240_cov_2.329843_g6208_i0 PRJNA1105232 6424 240 2.329843 5.5916232 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 73.6 4.42e-13   NR MCH7959994.1 2030809 g6208 i0 45.3 0.9375 75 41 93.8 0 3 227 313 387 MCH7959994.1 fibronectin type III domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 225 73.6 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
32785733 32785733 PRJNA1105232_S_NODE_3260_length_313_cov_2.393939_g3044_i0 PRJNA1105232 3260 313 2.393939 7.49302907 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 104 5.63e-24   NR MBI3117280.1 2030809 g3044 i0 47.1 0.977635782747604 102 51 97.8 1 313 8 292 390 MBI3117280.1 fibronectin type III domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 306 104 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;