RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1105232" and tax_kingdom = "Thermoproteati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJNA1105232 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
212546 212546 PRJNA1105232_S_NODE_11561_length_190_cov_1.106383_g11345_i0 PRJNA1105232 11561 190 1.106383 2.1021277 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.016   NTclustered gi|323706731|gb|CP002529.1| 985053 g11345 i0 100 0.147368421052632 28 0 15 0 34 61 336127 336100 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia
29238079 29238079 PRJNA1105232_S_NODE_6289_length_242_cov_3.191710_g6073_i0 PRJNA1105232 6289 242 3.19171 7.7239382 root 1 Root_unresolved Root_unresolved 115 2.73e-28   NR MEJ2242517.1 2026714 g6073 i0 65.8 1.95867768595041 79 27 97.9 0 2 238 345 423 MEJ2242517.1 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein [Candidatus Bathyarchaeota archaeon] diamond 474 115 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
30975385 30975385 PRJNA1105232_S_NODE_7334_length_228_cov_1.921788_g7118_i0 PRJNA1105232 7334 228 1.921788 4.38167664 Archaea 2157 Archaea Archaea 82.8 2.32e-16   NR MBD3186251.1 2026714 g7118 i0 49.3 2.96052631578947 75 38 98.7 0 227 3 487 561 MBD3186251.1 AMP-binding protein [Candidatus Bathyarchaeota archaeon] diamond 675 83.2 0.995192307692308 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;