RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1105232", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1105232 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27067598 27067598 PRJNA1105232_S_NODE_12782_length_182_cov_1.563910_g12566_i0 PRJNA1105232 12782 182 1.56391 2.8463162 Coelomomyces lativittatus 945690 Fungi Fungi 47.8 2.84e-4   NR KAJ1507399.1 945690 g12566 i0 43.1 2.8021978021978 51 29 84.1 0 2 154 117 167 KAJ1507399.1 exosome catalytic subunit dis3 [Coelomomyces lativittatus] diamond 510 47.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus
28204506 28204506 PRJNA1105232_S_NODE_15166_length_169_cov_1.300000_g14950_i0 PRJNA1105232 15166 169 1.3 2.197 Paraphysoderma sedebokerense 1500003 Fungi Fungi 57.8 4.3e-8   NR KAI9145498.1 1500003 g14950 i0 46.2 0.923076923076923 52 28 92.3 0 157 2 138 189 KAI9145498.1 RmlC-like cupin domain-containing protein [Paraphysoderma sedebokerense] diamond 156 57.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
29499158 29499158 PRJNA1105232_S_NODE_9270_length_208_cov_1.635220_g9054_i0 PRJNA1105232 9270 208 1.63522 3.4012576 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 69.7 7.32e-12   NR KAI9183213.1 1313167 g9054 i0 42 0.995192307692308 69 40 99.5 0 208 2 463 531 KAI9183213.1 hypothetical protein H9P43_004130 [Blastocladiella emersonii ATCC 22665] diamond 207 69.7 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
29751569 29751569 PRJNA1105232_S_NODE_11971_length_187_cov_1.507246_g11755_i0 PRJNA1105232 11971 187 1.507246 2.81855002 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 61.6 5.6e-10   NR KNE62358.1 578462 g11755 i0 54.2 0.946524064171123 59 22 94.7 1 185 9 48 101 KNE62358.1 hypothetical protein AMAG_07584 [Allomyces macrogynus ATCC 38327] diamond 177 61.6 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;