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contig_metadata

24 rows where bioproject = "PRJNA1105232", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 24 ✖

tax_clade 1

  • Sar · 24 ✖

bioproject 1

  • PRJNA1105232 · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2295838 2295838 PRJNA1105232_S_NODE_3042_length_322_cov_2.274725_g2826_i0 PRJNA1105232 3042 322 2.274725 7.3246145 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 158 6.23e-34   NTclustered gi|301119740|ref|XM_002907552.1| 403677 g2826 i0 79.149 49.6304347826087 235 43 72 5 1 232 450 219 Phytophthora infestans T30-4 60S ribosomal protein L23a (PITG_02694), mRNA blastn 15981 158 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
4039357 4039357 PRJNA1105232_S_NODE_1904_length_383_cov_2.278443_g1688_i0 PRJNA1105232 1904 383 2.278443 8.72643669 Viridiplantae 33090 SAR_Eukaryotes SAR_Eukaryotes 190 2.219999999999999e-55   NR KAF1313838.1 82926 g1688 i0 77.6 7.90339425587467 125 27 97.1 1 3 374 340 464 KAF1313838.1 Dihydrolipoyl dehydrogenase, partial [Globisporangium splendens] diamond 3027 190 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
9140206 9140206 PRJNA1105232_S_NODE_5848_length_249_cov_2.860000_g5632_i0 PRJNA1105232 5848 249 2.86 7.1214 Phytophthora nicotianae 4792 SAR_Eukaryotes SAR_Eukaryotes 148 2.7899999999999996e-31   NTclustered gi|675169594|ref|XM_008895434.1| 761204 g5632 i0 79.245 3.71084337349398 212 44 85 0 35 246 482 271 Phytophthora parasitica INRA-310 40S ribosomal protein S16 mRNA blastn 924 148 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
10416030 10416030 PRJNA1105232_S_NODE_2889_length_328_cov_1.301075_g2673_i0 PRJNA1105232 2889 328 1.301075 4.267526 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 81.3 1.37e-15   NR XP_009843210.1 112090 g2673 i0 44.6 1.875 101 53 92.4 2 26 328 182 279 XP_009843210.1 hypothetical protein H257_16475 [Aphanomyces astaci] diamond 615 81.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
20613770 20613770 PRJNA1105232_S_NODE_9397_length_207_cov_1.601266_g9181_i0 PRJNA1105232 9397 207 1.601266 3.31462062 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 86.3 1.07e-17   NR TMW66879.1 41045 g9181 i0 63.2 1.97101449275362 68 22 98.6 2 3 206 947 1011 TMW66879.1 hypothetical protein Poli38472_011995 [Pythium oligandrum] diamond 408 86.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
21889405 21889405 PRJNA1105232_S_NODE_4638_length_273_cov_2.361607_g4422_i0 PRJNA1105232 4638 273 2.361607 6.44718711 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 137 4.3299999999999995e-37   NR RHY25634.1 157072 g4422 i0 74.2 3.93406593406593 89 23 97.8 0 6 272 202 290 RHY25634.1 hypothetical protein DYB32_008190 [Aphanomyces invadans] diamond 1074 138 0.992753623188406 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
26647281 26647281 PRJNA1105232_S_NODE_10021_length_202_cov_1.013072_g9805_i0 PRJNA1105232 10021 202 1.013072 2.04640544 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 52 9.4e-6   NR KAF0737942.1 100861 g9805 i0 35.4 3.59405940594059 65 42 96.5 0 202 8 135 199 KAF0737942.1 hypothetical protein Ae201684_005938 [Aphanomyces euteiches] diamond 726 52.4 0.99236641221374 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
26750790 26750790 PRJNA1105232_S_NODE_15581_length_168_cov_0.873950_g15365_i0 PRJNA1105232 15581 168 0.87395 1.468236 Hyaloperonospora brassicae 162125 SAR_Eukaryotes SAR_Eukaryotes 70.1 2.13e-12   NR CAI5734323.1 162125 g15365 i0 58.7 1.64285714285714 46 19 82.1 0 27 164 241 286 CAI5734323.1 unnamed protein product [Hyaloperonospora brassicae] diamond 276 70.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora brassicae
27668091 27668091 PRJNA1105232_S_NODE_8624_length_214_cov_1.206061_g8408_i0 PRJNA1105232 8624 214 1.206061 2.58097054 Albugo laibachii Nc14 890382 SAR_Eukaryotes SAR_Eukaryotes 65.9 1.72e-10   NR CCA17511.1 890382 g8408 i0 50 0.981308411214953 70 31 98.1 2 212 3 407 472 CCA17511.1 3phosphoinositidedependent protein kinase putative [Albugo laibachii Nc14] diamond 210 65.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
27699849 27699849 PRJNA1105232_S_NODE_8704_length_213_cov_1.902439_g8488_i0 PRJNA1105232 8704 213 1.902439 4.05219507 Phytophthora kernoviae 325452 SAR_Eukaryotes SAR_Eukaryotes 48.5 2.25e-4   NR RLN49845.1 325452 g8488 i0 52.3 0.619718309859155 44 21 62 0 212 81 526 569 RLN49845.1 hypothetical protein BBJ29_004582 [Phytophthora kernoviae] diamond 132 48.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora kernoviae
28646850 28646850 PRJNA1105232_S_NODE_4467_length_277_cov_3.114035_g4251_i0 PRJNA1105232 4467 277 3.114035 8.62587695 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 147 1.09e-39   NR GLD96127.1 114742 g4251 i0 87.2 1.86281588447653 86 11 93.1 0 5 262 428 513 GLD96127.1 hypothetical protein PINS_up004805 [Pythium insidiosum] diamond 516 147 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
29522061 29522061 PRJNA1105232_S_NODE_4070_length_287_cov_4.957983_g3854_i0 PRJNA1105232 4070 287 4.957983 14.22941121 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 49.3 2.98e-4   NR XP_009825362.1 112090 g3854 i0 35.5 3.8780487804878 93 56 94.1 4 1 270 73 164 XP_009825362.1 hypothetical protein H257_03107 [Aphanomyces astaci] diamond 1113 49.7 0.991951710261569 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
29964290 29964290 PRJNA1105232_S_NODE_6671_length_237_cov_1.377660_g6455_i0 PRJNA1105232 6671 237 1.37766 3.2650542 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 48.5 3.24e-4   NR KAG7388619.1 221518 g6455 i0 37.3 3.58227848101266 75 46 93.7 1 236 15 2776 2850 KAG7388619.1 hypothetical protein PHYPSEUDO_012110 [Phytophthora pseudosyringae] diamond 849 48.9 0.991820040899796 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora pseudosyringae
30162261 30162261 PRJNA1105232_S_NODE_6452_length_240_cov_1.089005_g6236_i0 PRJNA1105232 6452 240 1.089005 2.613612 Phytophthora megakarya 4795 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.00283   NR OWZ17616.1 4795 g6236 i0 28.4 2.875 116 46 98.8 2 3 239 336 451 OWZ17616.1 Ubiquitin-associated/translation elongation factor EF1B [Phytophthora megakarya] diamond 690 45.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora megakarya
30762892 30762892 PRJNA1105232_S_NODE_6294_length_242_cov_2.849741_g6078_i0 PRJNA1105232 6294 242 2.849741 6.89637322 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0277   NR OQR92289.1 74557 g6078 i0 43.5 0.570247933884298 46 26 57 0 229 92 1618 1663 OQR92289.1 transmembrane protein [Thraustotheca clavata] diamond 138 43.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
31132963 31132963 PRJNA1105232_S_NODE_16095_length_166_cov_1.213675_g15879_i0 PRJNA1105232 16095 166 1.213675 2.0147005 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 70.5 1.32e-13   NR KAE8911393.1 53985 g15879 i0 59.3 4.86144578313253 54 22 97.6 0 162 1 35 88 KAE8911393.1 hypothetical protein PF003_g4481 [Phytophthora fragariae] diamond 807 71.2 0.990168539325843 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae
31164543 31164543 PRJNA1105232_S_NODE_11255_length_192_cov_1.335664_g11039_i0 PRJNA1105232 11255 192 1.335664 2.56447488 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 46.6 8e-4   NR OQS04165.1 74557 g11039 i0 44.2 1.53125 52 24 73.4 1 143 3 286 337 OQS04165.1 hypothetical protein THRCLA_20950 [Thraustotheca clavata] diamond 294 47 0.991489361702128 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
31331581 31331581 PRJNA1105232_S_NODE_16176_length_166_cov_0.880342_g15960_i0 PRJNA1105232 16176 166 0.880342 1.46136772 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 50.1 3.31e-5   NR GLD96156.1 114742 g15960 i0 48.1 2.92771084337349 54 28 97.6 0 164 3 435 488 GLD96156.1 hypothetical protein PINS_up004834 [Pythium insidiosum] diamond 486 50.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
32113886 32113886 PRJNA1105232_S_NODE_14578_length_172_cov_1.268293_g14362_i0 PRJNA1105232 14578 172 1.268293 2.18146396 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 62.8 7.6e-10   NR CCI41261.1 65357 g14362 i0 50.9 3.87209302325581 55 27 95.9 0 169 5 117 171 CCI41261.1 unnamed protein product [Albugo candida] diamond 666 63.2 0.993670886075949 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
32303926 32303926 PRJNA1105232_S_NODE_5699_length_252_cov_1.241379_g5483_i0 PRJNA1105232 5699 252 1.241379 3.12827508 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 70.5 6.7e-12   NR XP_012207081.1 695850 g5483 i0 35.8 1.95238095238095 81 51 96.4 1 2 244 342 421 XP_012207081.1 hypothetical protein SPRG_12331 [Saprolegnia parasitica CBS 223.65] diamond 492 71.2 0.990168539325843 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
32493653 32493653 PRJNA1105232_S_NODE_12559_length_183_cov_2.328358_g12343_i0 PRJNA1105232 12559 183 2.328358 4.26089514 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.00782   NR KAG7397295.1 109152 g12343 i0 34.5 1.81967213114754 58 37 93.4 1 3 173 80 137 KAG7397295.1 ATP synthase subunit delta, mitochondrial [Phytophthora boehmeriae] diamond 333 43.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora boehmeriae
32525465 32525465 PRJNA1105232_S_NODE_2519_length_345_cov_4.057432_g2303_i0 PRJNA1105232 2519 345 4.057432 13.9981404 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 173 1.68e-52   NR KAF1314619.1 82926 g2303 i0 72.3 7.89565217391304 112 31 97.4 0 338 3 73 184 KAF1314619.1 Peroxiredoxin-2, partial [Globisporangium splendens] diamond 2724 173 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
32588479 32588479 PRJNA1105232_S_NODE_9779_length_204_cov_1.341935_g9563_i0 PRJNA1105232 9779 204 1.341935 2.7375474 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 55.5 7.49e-7   NR KAG3046993.1 29920 g9563 i0 43.5 8.11764705882353 69 36 97.1 1 204 7 716 784 KAG3046993.1 AP-1 complex subunit gamma-2 [Phytophthora cactorum] diamond 1656 55.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
32840022 32840022 PRJNA1105232_S_NODE_13640_length_177_cov_1.218750_g13424_i0 PRJNA1105232 13640 177 1.21875 2.1571875 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 65.9 1.05e-10   NR DBA03454.1 4803 g13424 i0 57.1 4.74576271186441 56 24 94.9 0 170 3 211 266 DBA03454.1 TPA: hypothetical protein N0F65_002862 [Lagenidium giganteum] diamond 840 65.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;