contig_metadata
13 rows where bioproject = "PRJNA1105232", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26719139 | 26719139 | PRJNA1105232_S_NODE_701_length_557_cov_6.143701_g493_i0 | PRJNA1105232 | 701 | 557 | 6.143701 | 34.22041457 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 96.7 | 2e-20 | NR | HZU34768.1 | 2052164 | g493 | i0 | 54.3 | 0.495511669658887 | 92 | 39 | 47.9 | 2 | 216 | 482 | 186 | 277 | HZU34768.1 glycoside hydrolase family 19 protein [Gemmataceae bacterium] | diamond | 276 | 96.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 27762937 | 27762937 | PRJNA1105232_S_NODE_2604_length_341_cov_3.609589_g2388_i0 | PRJNA1105232 | 2604 | 341 | 3.609589 | 12.30869849 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 114 | 6.480000000000001e-27 | NR | MDP7030110.1 | 2052180 | g2388 | i0 | 50 | 0.98533724340176 | 112 | 55 | 97.7 | 1 | 9 | 341 | 293 | 404 | MDP7030110.1 M14 family zinc carboxypeptidase [Phycisphaerales bacterium] | diamond | 336 | 114 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 27848543 | 27848543 | PRJNA1105232_S_NODE_6804_length_235_cov_1.059140_g6588_i0 | PRJNA1105232 | 6804 | 235 | 1.05914 | 2.488979 | Bacteria | 2 | Bacteria | Bacteria | 85.5 | 3.05e-17 | NR | GMU22953.1 | 2026778 | g6588 | i0 | 52.5 | 1.88936170212766 | 80 | 36 | 99.6 | 1 | 235 | 2 | 1290 | 1369 | GMU22953.1 MAG: hypothetical protein AMXMBFR13_30370 [Phycisphaerae bacterium] | diamond | 444 | 85.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 27857319 | 27857319 | PRJNA1105232_S_NODE_7405_length_227_cov_2.044944_g7189_i0 | PRJNA1105232 | 7405 | 227 | 2.044944 | 4.64202288 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 63.9 | 1.03e-9 | NR | MSR41607.1 | 2052180 | g7189 | i0 | 46.6 | 1.9295154185022 | 73 | 35 | 91.2 | 2 | 9 | 215 | 359 | 431 | MSR41607.1 hypothetical protein [Phycisphaerales bacterium] | diamond | 438 | 63.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 28701330 | 28701330 | PRJNA1105232_S_NODE_6167_length_244_cov_1.953846_g5951_i0 | PRJNA1105232 | 6167 | 244 | 1.953846 | 4.76738424 | Candidatus Uabimicrobium | 2897349 | Bacteria | Bacteria | 99 | 1.57e-22 | NR | WP_368239156.1 | 2596890 | g5951 | i0 | 54.9 | 3.02459016393443 | 82 | 36 | 99.6 | 1 | 2 | 244 | 188 | 269 | WP_368239156.1 polysaccharide deacetylase family protein [Candidatus Uabimicrobium amorphum] | diamond | 738 | 100 | 0.99 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Uabimicrobiia | Candidatus Uabimicrobiales | Candidatus Uabimicrobiaceae | Candidatus Uabimicrobium | Candidatus Uabimicrobium amorphum | |
| 29120571 | 29120571 | PRJNA1105232_S_NODE_17369_length_162_cov_0.920354_g17153_i0 | PRJNA1105232 | 17369 | 162 | 0.920354 | 1.49097348 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 41.6 | 0.0314 | NR | MEM8758000.1 | 2026780 | g17153 | i0 | 41 | 0.722222222222222 | 39 | 23 | 72.2 | 0 | 136 | 20 | 136 | 174 | MEM8758000.1 glycosyltransferase family 9 protein [Planctomycetota bacterium] | diamond | 117 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 29332711 | 29332711 | PRJNA1105232_S_NODE_15109_length_169_cov_1.933333_g14893_i0 | PRJNA1105232 | 15109 | 169 | 1.933333 | 3.26733277 | root | 1 | Root_unresolved | Root_unresolved | 50.1 | 3.57e-5 | NR | WP_162658356.1 | 692036 | g14893 | i0 | 46.2 | 3.67455621301775 | 52 | 27 | 90.5 | 1 | 169 | 17 | 101 | 152 | WP_162658356.1 molecular chaperone DnaJ [Tuwongella immobilis] | diamond | 621 | 50.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Tuwongella | Tuwongella immobilis | |
| 29499155 | 29499155 | PRJNA1105232_S_NODE_15150_length_169_cov_1.391667_g14934_i0 | PRJNA1105232 | 15150 | 169 | 1.391667 | 2.35191723 | Isosphaeraceae bacterium | 2691532 | Bacteria | Bacteria | 84 | 4.14e-17 | NR | HMB03388.1 | 2691532 | g14934 | i0 | 67.9 | 1.97041420118343 | 56 | 18 | 99.4 | 0 | 168 | 1 | 259 | 314 | HMB03388.1 LodA/GoxA family CTQ-dependent oxidase [Isosphaeraceae bacterium] | diamond | 333 | 84 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium | ||
| 29774572 | 29774572 | PRJNA1105232_S_NODE_14471_length_172_cov_3.357724_g14255_i0 | PRJNA1105232 | 14471 | 172 | 3.357724 | 5.77528528 | Candidatus Uabimicrobium | 2897349 | Bacteria | Bacteria | 52.4 | 5.7e-6 | NR | WP_151971054.1 | 2596890 | g14255 | i0 | 43.8 | 3.38372093023256 | 48 | 27 | 83.7 | 0 | 28 | 171 | 350 | 397 | WP_151971054.1 SGNH/GDSL hydrolase family protein [Candidatus Uabimicrobium amorphum] | diamond | 582 | 52.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Uabimicrobiia | Candidatus Uabimicrobiales | Candidatus Uabimicrobiaceae | Candidatus Uabimicrobium | Candidatus Uabimicrobium amorphum | |
| 29941491 | 29941491 | PRJNA1105232_S_NODE_17671_length_160_cov_2.216216_g17455_i0 | PRJNA1105232 | 17671 | 160 | 2.216216 | 3.5459456 | Pirellulaceae bacterium | 2699754 | Bacteria | Bacteria | 70.5 | 2.8e-13 | NR | HEX5103568.1 | 2699754 | g17455 | i0 | 64 | 3.80625 | 50 | 18 | 93.8 | 0 | 7 | 156 | 109 | 158 | HEX5103568.1 DUF885 domain-containing protein [Pirellulaceae bacterium] | diamond | 609 | 70.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellulaceae bacterium | ||
| 30699497 | 30699497 | PRJNA1105232_S_NODE_17334_length_162_cov_0.920354_g17118_i0 | PRJNA1105232 | 17334 | 162 | 0.920354 | 1.49097348 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 57.4 | 4.11e-8 | NR | HIJ72320.1 | 2026780 | g17118 | i0 | 50.9 | 0.981481481481482 | 53 | 25 | 98.1 | 1 | 3 | 161 | 109 | 160 | HIJ72320.1 YdcF family protein [Planctomycetota bacterium] | diamond | 159 | 57.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31015553 | 31015553 | PRJNA1105232_S_NODE_12975_length_181_cov_1.181818_g12759_i0 | PRJNA1105232 | 12975 | 181 | 1.181818 | 2.13909058 | Candidatus Uabimicrobium amorphum | 2596890 | Bacteria | Bacteria | 69.3 | 6.44e-12 | NR | WP_151966163.1 | 2596890 | g12759 | i0 | 71.1 | 2.2707182320442 | 45 | 13 | 74.6 | 0 | 27 | 161 | 265 | 309 | WP_151966163.1 M28 family metallopeptidase [Candidatus Uabimicrobium amorphum] | diamond | 411 | 69.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Uabimicrobiia | Candidatus Uabimicrobiales | Candidatus Uabimicrobiaceae | Candidatus Uabimicrobium | Candidatus Uabimicrobium amorphum | |
| 32439165 | 32439165 | PRJNA1105232_S_NODE_13279_length_179_cov_1.500000_g13063_i0 | PRJNA1105232 | 13279 | 179 | 1.5 | 2.685 | Planctomycetes bacterium TBK1r | 2527963 | Bacteria | Bacteria | 45.1 | 0.00245 | NR | QDV82623.1 | 2527963 | g13063 | i0 | 40.8 | 1.42458100558659 | 49 | 29 | 82.1 | 0 | 155 | 9 | 489 | 537 | QDV82623.1 CHAT domain protein [Planctomycetes bacterium TBK1r] | diamond | 255 | 45.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Stieleria | Stieleria magnilauensis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;