RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1105232", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 1 ✖

tax_clade 1

  • Metamonada · 1 ✖

bioproject 1

  • PRJNA1105232 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29246588 29246588 PRJNA1105232_S_NODE_5469_length_256_cov_1.507246_g5253_i0 PRJNA1105232 5469 256 1.507246 3.85854976 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 94.4 2.08e-20   NR KAG9394081.1 201153 g5253 i0 55.3 3.97265625 85 25 99.6 1 255 1 366 437 KAG9394081.1 DEAD/DEAH box helicase [Carpediemonas membranifera] diamond 1017 94.4 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;