RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1105232", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA1105232 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26655951 26655951 PRJNA1105232_S_NODE_10581_length_197_cov_1.756757_g10365_i0 PRJNA1105232 10581 197 1.756757 3.46081129 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 42.4 0.0283   NR MDZ4835227.1 2052166 g10365 i0 41.7 0.913705583756345 60 35 91.4 0 2 181 792 851 MDZ4835227.1 serine/threonine-protein kinase [Candidatus Melainabacteria bacterium] diamond 180 42.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
28678474 28678474 PRJNA1105232_S_NODE_15507_length_168_cov_1.310924_g15291_i0 PRJNA1105232 15507 168 1.310924 2.20235232 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 58.5 2.69e-9   NR HEY9785743.1 2364082 g15291 i0 50 1 56 27 98.2 1 168 4 26 81 HEY9785743.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 168 58.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
29909902 29909902 PRJNA1105232_S_NODE_5971_length_247_cov_2.095960_g5755_i0 PRJNA1105232 5971 247 2.09596 5.1770212 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 100 1.39e-22   NR MBK9142933.1 2052166 g5755 i0 53.7 0.995951417004049 82 38 99.6 0 246 1 783 864 MBK9142933.1 thiamine pyrophosphate-requiring protein [Candidatus Melainabacteria bacterium] diamond 246 100 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;