RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1105232" and tax_clade = "Bacteria candidate phyla"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1105232 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26972693 26972693 PRJNA1105232_S_NODE_13782_length_176_cov_1.637795_g13566_i0 PRJNA1105232 13782 176 1.637795 2.8825192 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 68.6 8.08e-13   NR MCY4553928.1 2026781 g13566 i0 53.8 4.39772727272727 52 24 88.6 0 163 8 6 57 MCY4553928.1 phosphotransferase [Candidatus Poribacteria bacterium] diamond 774 68.6 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
27794396 27794396 PRJNA1105232_S_NODE_11684_length_189_cov_1.421429_g11468_i0 PRJNA1105232 11684 189 1.421429 2.68650081 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 52.4 7.42e-6   NR NLM17936.1 2053586 g11468 i0 41.4 2.46031746031746 58 33 90.5 1 183 13 608 665 NLM17936.1 S9 family peptidase [Candidatus Rifleibacteriota bacterium] diamond 465 52.4 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
29467327 29467327 PRJNA1105232_S_NODE_13450_length_178_cov_1.612403_g13234_i0 PRJNA1105232 13450 178 1.612403 2.87007734 Candidatus Moraniibacteriota bacterium 2045217 Bacteria Bacteria 43.5 0.00818   NR MDD5084375.1 2045217 g13234 i0 38.2 1.76966292134831 55 34 92.7 0 2 166 57 111 MDD5084375.1 DUF3293 domain-containing protein [Candidatus Moraniibacteriota bacterium] diamond 315 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Moraniibacteriota         Candidatus Moraniibacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;