contig_metadata
14 rows where bioproject = "PRJNA1104180", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2763029 | 2763029 | PRJNA1104180_P_NODE_17483_length_264_cov_1.308901_g17341_i0 | PRJNA1104180 | 17483 | 264 | 1.308901 | 3.45549864 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 148 | 4.45e-39 | NR | HEY8279362.1 | 3034175 | g17341 | i0 | 90.9 | 1 | 88 | 8 | 100 | 0 | 264 | 1 | 841 | 928 | HEY8279362.1 vitamin B12-dependent ribonucleotide reductase [Bdellovibrionota bacterium] | diamond | 264 | 148 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 12499107 | 12499107 | PRJNA1104180_P_NODE_19210_length_255_cov_1.692308_g19067_i0 | PRJNA1104180 | 19210 | 255 | 1.692308 | 4.3153854 | Bdellovibrio | 958 | Bacteria | Bacteria | 326 | 1.2399999999999999e-84 | NTclustered | gi|1700693790|gb|CP030082.1| | 2231053 | g19067 | i0 | 89.883 | 87.5098039215686 | 257 | 21 | 99 | 5 | 2 | 255 | 1963880 | 1964134 | Bdellovibrio sp. ZAP7 chromosome, complete genome | blastn | 22315 | 326 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. ZAP7 | ||
| 26719132 | 26719132 | PRJNA1104180_P_NODE_24821_length_243_cov_1.811765_g24678_i0 | PRJNA1104180 | 24821 | 243 | 1.811765 | 4.40258895 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 57.4 | 2.51e-7 | NR | HEY8280043.1 | 3034175 | g24678 | i0 | 76.5 | 0.419753086419753 | 34 | 8 | 42 | 0 | 103 | 2 | 4 | 37 | HEY8280043.1 long-chain fatty acid--CoA ligase [Bdellovibrionota bacterium] | diamond | 102 | 57.4 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 27478483 | 27478483 | PRJNA1104180_P_NODE_21983_length_248_cov_0.880000_g21840_i0 | PRJNA1104180 | 21983 | 248 | 0.88 | 2.1824 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 72.8 | 1.03e-12 | NR | HEY8278403.1 | 3034175 | g21840 | i0 | 77.3 | 0.532258064516129 | 44 | 10 | 53.2 | 0 | 133 | 2 | 1 | 44 | HEY8278403.1 serine protein kinase PrkA [Bdellovibrionota bacterium] | diamond | 132 | 72.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 28078320 | 28078320 | PRJNA1104180_P_NODE_21545_length_249_cov_0.875000_g21402_i0 | PRJNA1104180 | 21545 | 249 | 0.875 | 2.17875 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 130 | 4.48e-35 | NR | MCB0413676.1 | 2053517 | g21402 | i0 | 74.7 | 1 | 83 | 21 | 100 | 0 | 249 | 1 | 77 | 159 | MCB0413676.1 RNA polymerase sigma factor [Bdellovibrionales bacterium] | diamond | 249 | 130 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 28417178 | 28417178 | PRJNA1104180_P_NODE_20046_length_251_cov_1.657303_g19903_i0 | PRJNA1104180 | 20046 | 251 | 1.657303 | 4.15983053 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 114 | 2.93e-27 | NR | MCB0325377.1 | 2053517 | g19903 | i0 | 65.4 | 1.9601593625498 | 81 | 28 | 96.8 | 0 | 248 | 6 | 157 | 237 | MCB0325377.1 group II intron reverse transcriptase/maturase [Bdellovibrionales bacterium] | diamond | 492 | 114 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 29751564 | 29751564 | PRJNA1104180_P_NODE_18051_length_261_cov_1.351064_g17909_i0 | PRJNA1104180 | 18051 | 261 | 1.351064 | 3.52627704 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 60.1 | 3.71e-8 | NR | MBK7890750.1 | 2053517 | g17909 | i0 | 45.2 | 0.96551724137931 | 84 | 43 | 95.4 | 3 | 12 | 260 | 1477 | 1558 | MBK7890750.1 DUF2341 domain-containing protein [Bdellovibrionales bacterium] | diamond | 252 | 60.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30004602 | 30004602 | PRJNA1104180_P_NODE_20031_length_251_cov_1.724719_g19888_i0 | PRJNA1104180 | 20031 | 251 | 1.724719 | 4.32904469 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 143 | 8.34e-41 | NR | MBA2404721.1 | 2053517 | g19888 | i0 | 85.4 | 3.9203187250996 | 82 | 12 | 98 | 0 | 4 | 249 | 17 | 98 | MBA2404721.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 984 | 143 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30036139 | 30036139 | PRJNA1104180_P_NODE_14571_length_280_cov_1.178744_g14429_i0 | PRJNA1104180 | 14571 | 280 | 1.178744 | 3.3004832 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 108 | 1.16e-25 | NR | MBY0516305.1 | 2081706 | g14429 | i0 | 58.4 | 0.953571428571429 | 89 | 37 | 95.4 | 0 | 2 | 268 | 151 | 239 | MBY0516305.1 catalase [Bacteriovoracaceae bacterium] | diamond | 267 | 108 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 30193955 | 30193955 | PRJNA1104180_P_NODE_16492_length_269_cov_1.571429_g16350_i0 | PRJNA1104180 | 16492 | 269 | 1.571429 | 4.22714401 | Micavibrio sp. | 2024841 | Bacteria | Bacteria | 156 | 8.059999999999999e-46 | NR | MAI62891.1 | 2024841 | g16350 | i0 | 77.5 | 0.992565055762082 | 89 | 20 | 99.3 | 0 | 3 | 269 | 47 | 135 | MAI62891.1 hypothetical protein [Micavibrio sp.] | diamond | 267 | 156 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio sp. | ||
| 30604733 | 30604733 | PRJNA1104180_P_NODE_17053_length_266_cov_1.595855_g16911_i0 | PRJNA1104180 | 17053 | 266 | 1.595855 | 4.2449743 | Bdellovibrio sp. | 28201 | Bacteria | Bacteria | 66.6 | 9.23e-11 | NR | MFN7729575.1 | 28201 | g16911 | i0 | 45.7 | 0.789473684210526 | 70 | 38 | 78.9 | 0 | 259 | 50 | 182 | 251 | MFN7729575.1 hypothetical protein [Bdellovibrio sp.] | diamond | 210 | 66.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 32312635 | 32312635 | PRJNA1104180_P_NODE_23759_length_245_cov_0.895349_g23616_i0 | PRJNA1104180 | 23759 | 245 | 0.895349 | 2.19360505 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 134 | 2.13e-36 | NR | MFN8945129.1 | 2026715 | g23616 | i0 | 85.4 | 1.00408163265306 | 82 | 11 | 99.2 | 1 | 2 | 244 | 167 | 248 | MFN8945129.1 type II secretion system protein GspC [Pseudobdellovibrionaceae bacterium] | diamond | 246 | 134 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 32722933 | 32722933 | PRJNA1104180_P_NODE_19220_length_255_cov_1.692308_g19077_i0 | PRJNA1104180 | 19220 | 255 | 1.692308 | 4.3153854 | Oligoflexia bacterium | 2599941 | Bacteria | Bacteria | 147 | 3.989999999999999e-41 | NR | MCO5142820.1 | 2599941 | g19077 | i0 | 85.7 | 2.96470588235294 | 84 | 12 | 98.8 | 0 | 2 | 253 | 78 | 161 | MCO5142820.1 ABC transporter ATP-binding protein [Oligoflexia bacterium] | diamond | 756 | 147 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexia bacterium | |||||
| 32785729 | 32785729 | PRJNA1104180_P_NODE_19280_length_255_cov_1.313187_g19137_i0 | PRJNA1104180 | 19280 | 255 | 1.313187 | 3.34862685 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 109 | 1.1500000000000002e-27 | NR | MCB0416969.1 | 2053517 | g19137 | i0 | 60.5 | 0.952941176470588 | 81 | 32 | 95.3 | 0 | 248 | 6 | 8 | 88 | MCB0416969.1 TetR family transcriptional regulator [Bdellovibrionales bacterium] | diamond | 243 | 109 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;