RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1104180", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1104180 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28204505 28204505 PRJNA1104180_P_NODE_25866_length_242_cov_0.911243_g25723_i0 PRJNA1104180 25866 242 0.911243 2.20520806 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 48.1 4.51e-4   NR HLX25562.1 2952917 g25723 i0 43.5 0.570247933884298 46 25 55.8 1 78 212 360 405 HLX25562.1 peptide ABC transporter substrate-binding protein [Candidatus Cybelea sp.] diamond 138 48.1 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.
31110155 31110155 PRJNA1104180_P_NODE_25955_length_242_cov_0.911243_g25812_i0 PRJNA1104180 25955 242 0.911243 2.20520806 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 154 2.5699999999999993e-43   NR MFN8611792.1 3107663 g25812 i0 97.5 1.98347107438017 80 2 99.2 0 3 242 35 114 MFN8611792.1 IS110 family transposase [Vulcanimicrobiota bacterium] diamond 480 154 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;