RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1104180", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA1104180 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2762955 2762955 PRJNA1104180_P_NODE_13183_length_288_cov_1.316279_g13041_i0 PRJNA1104180 13183 288 1.316279 3.79088352 uncultured Candidatus Entotheonella sp. 312019 Bacteria Bacteria 171 7.05e-38   NTclustered gi|2518596677|emb|OX639990.1| 312019 g13041 i0 79.842 1.88541666666667 253 35 86 12 1 247 421230 421472 MAG: uncultured Candidatus Entotheonella sp. isolate 26b0520c-cf9d-432e-a440-87a3e388b1d5 genome assembly, chromosome: 1 blastn 543 171 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella uncultured Candidatus Entotheonella sp.
10415851 10415851 PRJNA1104180_P_NODE_25009_length_243_cov_0.905882_g24866_i0 PRJNA1104180 25009 243 0.905882 2.20129326 uncultured Candidatus Entotheonella sp. 312019 Bacteria Bacteria 237 5.63e-58   NTclustered gi|2518596677|emb|OX639990.1| 312019 g24866 i0 87.156 40.7530864197531 218 16 88 10 31 243 1362739 1362949 MAG: uncultured Candidatus Entotheonella sp. isolate 26b0520c-cf9d-432e-a440-87a3e388b1d5 genome assembly, chromosome: 1 blastn 9903 237 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella uncultured Candidatus Entotheonella sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;