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contig_metadata

10 rows where bioproject = "PRJNA1103784" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 10 ✖

bioproject 1

  • PRJNA1103784 · 10 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1486840 1486840 PRJNA1103784_P_NODE_5502_length_253_cov_1.455556_g5447_i0 PRJNA1103784 5502 253 1.455556 3.68255668 archaeon 1906665 Archaea Archaea 99 2.99e-24   NR RYH30236.1 1906665 g5447 i0 67.5 0.984189723320158 83 19 94.9 2 241 2 29 106 RYH30236.1 MAG: hypothetical protein EON65_05740 [archaeon] diamond 249 99 1 Archaea               archaeon
10415530 10415530 PRJNA1103784_P_NODE_4029_length_282_cov_1.263158_g3974_i0 PRJNA1103784 4029 282 1.263158 3.56210556 archaeon 1906665 Archaea Archaea 150 3.2e-45   NR RYH28873.1 1906665 g3974 i0 80.7 0.936170212765957 88 17 93.6 0 275 12 1 88 RYH28873.1 MAG: hypothetical protein EON65_10550 [archaeon] diamond 264 150 1 Archaea               archaeon
11690830 11690830 PRJNA1103784_P_NODE_4610_length_270_cov_1.228426_g4555_i0 PRJNA1103784 4610 270 1.228426 3.3167502 archaeon 1906665 Archaea Archaea 151 3.5399999999999992e-43   NR RYG67029.1 1906665 g4555 i0 87.5 0.977777777777778 88 11 97.8 0 265 2 176 263 RYG67029.1 MAG: tryptophan--tRNA ligase [archaeon] diamond 264 151 1 Archaea               archaeon
23164446 23164446 PRJNA1103784_P_NODE_3379_length_300_cov_1.894273_g3324_i0 PRJNA1103784 3379 300 1.894273 5.682819 archaeon 1906665 Archaea Archaea 174 3.7499999999999997e-54   NR RYG58869.1 1906665 g3324 i0 83.8 1.98 99 16 99 0 3 299 14 112 RYG58869.1 MAG: 50S ribosomal protein L6 [archaeon] diamond 594 174 1 Archaea               archaeon
27794389 27794389 PRJNA1103784_P_NODE_7304_length_243_cov_0.905882_g7249_i0 PRJNA1103784 7304 243 0.905882 2.20129326 archaeon 1906665 Archaea Archaea 125 2.6399999999999997e-32   NR RYH08360.1 1906665 g7249 i0 71.6 1 81 23 100 0 243 1 137 217 RYH08360.1 MAG: class I SAM-dependent methyltransferase [archaeon] diamond 243 125 1 Archaea               archaeon
28173016 28173016 PRJNA1103784_P_NODE_6346_length_248_cov_0.880000_g6291_i0 PRJNA1103784 6346 248 0.88 2.1824 archaeon 1906665 Archaea Archaea 75.9 3.76e-16   NR RYG65594.1 1906665 g6291 i0 80 1.06451612903226 45 9 54.4 0 221 87 1 45 RYG65594.1 MAG: hypothetical protein EON64_11590, partial [archaeon] diamond 264 75.9 1 Archaea               archaeon
28235998 28235998 PRJNA1103784_P_NODE_3646_length_290_cov_1.769585_g3591_i0 PRJNA1103784 3646 290 1.769585 5.1317965 archaeon 1906665 Archaea Archaea 96.3 1.42e-23   NR RYG96209.1 1906665 g3591 i0 78.3 0.620689655172414 60 13 62.1 0 290 111 38 97 RYG96209.1 MAG: hypothetical protein EON65_54770, partial [archaeon] diamond 180 96.3 1 Archaea               archaeon
29806126 29806126 PRJNA1103784_P_NODE_4751_length_267_cov_1.448454_g4696_i0 PRJNA1103784 4751 267 1.448454 3.86737218 root 1 Root_unresolved Root_unresolved 69.3 2.1e-11   NR MFH1257285.1 2026736 g4696 i0 45.9 2.42696629213483 74 29 83.1 1 2 223 419 481 MFH1257285.1 saccharopine dehydrogenase C-terminal domain-containing protein [Candidatus Iainarchaeum archaeon] diamond 648 69.7 0.994261119081779 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Iainarchaeum Candidatus Iainarchaeum archaeon
31733924 31733924 PRJNA1103784_P_NODE_3937_length_284_cov_1.265403_g3882_i0 PRJNA1103784 3937 284 1.265403 3.59374452 Candidatus Marsarchaeota group 1 2203770 Archaea Archaea 80.5 3.04e-15   NR PSN82760.1 1978155 g3882 i0 45.2 4.7112676056338 93 43 97.2 2 283 8 108 193 PSN82760.1 MAG: IMP dehydrogenase [Candidatus Marsarchaeota G1 archaeon OSP_D] diamond 1338 81.3 0.990159901599016 Archaea Candidatus Marsarchaeota group 1 Thermoproteati Candidatus Marsarchaeota         Candidatus Marsarchaeota G1 archaeon OSP_D
32880275 32880275 PRJNA1103784_P_NODE_4800_length_266_cov_1.595855_g4745_i0 PRJNA1103784 4800 266 1.595855 4.2449743 archaeon 1906665 Archaea Archaea 116 4.529999999999999e-31   NR RYG68310.1 1906665 g4745 i0 80.7 0.992481203007519 88 16 99.2 1 2 265 29 115 RYG68310.1 MAG: hypothetical protein EON64_05455 [archaeon] diamond 264 116 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;