RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1103784", tax_phylum = "Preplasmiviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Preplasmiviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1103784 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2295611 2295611 PRJNA1103784_P_NODE_222_length_984_cov_1.805708_g181_i0 PRJNA1103784 222 984 1.805708 17.76816672 root 1 Root_unresolved Root_unresolved 1018 0   NTclustered gi|2616465679|gb|OR735196.1| 10515 g181 i0 100 99.9115853658537 551 0 100 0 434 984 3508 2958 Human adenovirus 2 isolate HAdV-C2/USA/11A6/2013, complete genome blastn 98313 1018 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
7397975 7397975 PRJNA1103784_P_NODE_5506_length_253_cov_1.416667_g5451_i0 PRJNA1103784 5506 253 1.416667 3.58416751 root 1 Root_unresolved Root_unresolved 462 8.95e-126   NTclustered gi|2288721861|gb|OP218818.1| 10535 g5451 i0 99.605 100 253 1 100 0 1 253 1975 1723 Unidentified adenovirus strain CHOP Ad5 blastn 25300 462 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;