RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1103784", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1103784 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27194000 27194000 PRJNA1103784_P_NODE_6082_length_249_cov_0.875000_g6027_i0 PRJNA1103784 6082 249 0.875 2.17875 Halichondria panicea 6063 Porifera other_Eukaryota 70.1 9.36e-12   NR XP_064382919.1 6063 g6027 i0 41.7 0.867469879518072 72 41 85.5 1 17 229 670 741 XP_064382919.1 uncharacterized protein LOC135331628 [Halichondria panicea] diamond 216 70.1 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
31164530 31164530 PRJNA1103784_P_NODE_2795_length_324_cov_1.227092_g2740_i0 PRJNA1103784 2795 324 1.227092 3.97577808 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 97.8 1.87e-21   NR XP_065180808.1 27933 g2740 i0 45.9 15.9814814814815 109 52 99.1 3 322 2 274 377 XP_065180808.1 actin, clone 302-like [Sycon ciliatum] diamond 5178 97.8 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;