RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1103784", tax_kingdom = "Metazoa" and tax_phylum = "Hemichordata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1103784 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16789254 16789254 PRJNA1103784_P_NODE_3254_length_305_cov_1.327586_g3199_i0 PRJNA1103784 3254 305 1.327586 4.0491373 Balanoglossus clavigerus 560604 Hemichordata other_Eukaryota 132 3.55e-26   NTclustered gi|336087622|emb|FN908615.1| 560604 g3199 i0 86.066 18.5377049180328 122 17 40 0 9 130 920 799 Balanoglossus clavigerus histone H2B-III and histone H2A-III genes blastn 5654 132 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Balanoglossus Balanoglossus clavigerus
28741464 28741464 PRJNA1103784_P_NODE_6047_length_249_cov_0.875000_g5992_i0 PRJNA1103784 6047 249 0.875 2.17875 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 77 3.25e-15   NR XP_006811579.1 10224 g5992 i0 50.6 0.927710843373494 77 36 92.8 2 236 6 57 131 XP_006811579.1 PREDICTED: prosaposin-like [Saccoglossus kowalevskii] diamond 231 77 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
29427135 29427135 PRJNA1103784_P_NODE_1329_length_441_cov_2.383152_g1274_i0 PRJNA1103784 1329 441 2.383152 10.50970032 Metazoa 33208 Hemichordata other_Eukaryota 142 9.06e-40   NR XP_070567552.1 63121 g1274 i0 51.4 3.78231292517007 140 68 95.2 0 441 22 42 181 XP_070567552.1 large ribosomal subunit protein uL13-like [Ptychodera flava] diamond 1668 142 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;