RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1103784", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1103784 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1486763 1486763 PRJNA1103784_P_NODE_1202_length_462_cov_1.791774_g1147_i0 PRJNA1103784 1202 462 1.791774 8.27799588 Eukaryota 2759 Fungi Fungi 234 1.81e-71   NR RKP06633.1 78915 g1147 i0 69.5 57.525974025974 154 45 100 1 1 462 312 463 RKP06633.1 ATP-utilizing phosphoenolpyruvate carboxykinase [Thamnocephalis sphaerospora] diamond 26577 234 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Sigmoideomycetaceae Thamnocephalis Thamnocephalis sphaerospora
29964271 29964271 PRJNA1103784_P_NODE_6511_length_247_cov_0.885057_g6456_i0 PRJNA1103784 6511 247 0.885057 2.18609079 Fungi 4751 Fungi Fungi 88.6 2.43e-20   NR KAJ9049811.1 34485 g6456 i0 63.2 12.9230769230769 76 27 91.1 1 3 227 60 135 KAJ9049811.1 60S ribosomal protein L27B, variant 2 [Entomophthora muscae] diamond 3192 88.6 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora muscae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;