RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1103784", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1103784 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1486837 1486837 PRJNA1103784_P_NODE_522_length_654_cov_2.027539_g468_i0 PRJNA1103784 522 654 2.027539 13.26010506 Rozella sp. 1932610 Fungi Fungi 235 6.019999999999999e-57   NTclustered gi|2468791009|gb|OQ702919.1| 1932610 g468 i0 84.49 36.5061162079511 245 31 47 5 122 362 4551 4310 Rozella sp. isolate PSC238 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 23875 235 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella sp.
16789256 16789256 PRJNA1103784_P_NODE_3354_length_301_cov_1.570175_g3299_i0 PRJNA1103784 3354 301 1.570175 4.72622675 Rozella allomycis CSF55 988480 Fungi Fungi 57.4 3.73e-8   NR EPZ31580.1 988480 g3299 i0 57.1 0.488372093023256 49 20 47.8 1 4 147 20 68 EPZ31580.1 60S acidic ribosomal protein P1-alpha 1 [Rozella allomycis CSF55] diamond 147 57.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;