RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

23 rows where bioproject = "PRJNA1103784", tax_kingdom = "Fungi" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 23 ✖

tax_kingdom 1

  • Fungi · 23 ✖

tax_clade 1

bioproject 1

  • PRJNA1103784 · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1486814 1486814 PRJNA1103784_P_NODE_4022_length_282_cov_1.325359_g3967_i0 PRJNA1103784 4022 282 1.325359 3.73751238 Malassezia globosa 76773 Fungi Fungi 418 2.2299999999999995e-112   NTclustered gi|164657737|ref|XM_001729943.1| 425265 g3967 i0 99.563 3.23049645390071 229 1 81 0 54 282 369 141 Malassezia globosa CBS 7966 uncharacterized protein (MGL_2981), partial mRNA blastn 911 418 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
2762905 2762905 PRJNA1103784_P_NODE_8043_length_231_cov_3.177215_g7988_i0 PRJNA1103784 8043 231 3.177215 7.33936665 Pseudozyma hubeiensis 327079 Fungi Fungi 122 1.55e-23   NTclustered gi|808368102|ref|XM_012334015.1| 1305764 g7988 i0 91.954 8.75757575757576 87 7 38 0 2 88 370 456 Pseudozyma hubeiensis SY62 hypothetical protein partial mRNA blastn 2023 122 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Pseudozyma Pseudozyma hubeiensis
3570710 3570710 PRJNA1103784_P_NODE_6423_length_247_cov_1.327586_g6368_i0 PRJNA1103784 6423 247 1.327586 3.27913742 Malassezia 55193 Fungi Fungi 457 4.05e-124   NTclustered gi|1321659621|gb|KY911094.1| 76775 g6368 i0 100 47.7773279352227 247 0 100 0 1 247 1098 852 Malassezia restricta mitochondrion, complete genome blastn 11801 457 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
7397968 7397968 PRJNA1103784_P_NODE_3226_length_306_cov_1.536481_g3171_i0 PRJNA1103784 3226 306 1.536481 4.70163186 Malassezia 55193 Fungi Fungi 566 8.239999999999998e-157   NTclustered gi|1321659621|gb|KY911094.1| 76775 g3171 i0 100 66.9509803921569 306 0 100 0 1 306 33046 32741 Malassezia restricta mitochondrion, complete genome blastn 20487 566 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
7864890 7864890 PRJNA1103784_P_NODE_7187_length_244_cov_0.900585_g7132_i0 PRJNA1103784 7187 244 0.900585 2.1974274 Malassezia restricta 76775 Fungi Fungi 326 1.17e-84   NTclustered gi|1546630767|ref|XM_027627044.1| 76775 g7132 i0 100 1.02868852459016 176 0 72 0 69 244 1209 1034 Malassezia restricta TBC1 domain family member 5 (MRET_0417), partial mRNA blastn 251 326 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
9139782 9139782 PRJNA1103784_P_NODE_7228_length_243_cov_3.376471_g7173_i0 PRJNA1103784 7228 243 3.376471 8.20482453 uncultured Boletaceae 335445 Fungi Fungi 204 5.71e-48   NTclustered gi|453073594|gb|JX215315.1| 335445 g7173 i0 82.645 98.9506172839506 242 31 99 8 3 242 122 354 Uncultured Boletaceae isolate DGGE gel band BJTL19 18S ribosomal RNA gene, partial sequence blastn 24045 204 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales Boletaceae   uncultured Boletaceae
10415510 10415510 PRJNA1103784_P_NODE_3029_length_313_cov_11.129167_g2974_i0 PRJNA1103784 3029 313 11.129167 34.83429271 Malassezia restricta 76775 Fungi Fungi 573 5.049999999999998e-159   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g2974 i0 100 77.8402555910543 310 0 99 0 4 313 3282 2973 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 24364 573 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
10415604 10415604 PRJNA1103784_P_NODE_7629_length_242_cov_0.911243_g7574_i0 PRJNA1103784 7629 242 0.911243 2.20520806 Malassezia restricta 76775 Fungi Fungi 448 2.3799999999999995e-121   NTclustered gi|1546630459|ref|XM_027626890.1| 76775 g7574 i0 100 1.97520661157025 242 0 100 0 1 242 450 691 Malassezia restricta nicotinamide mononucleotide adenylyltransferase (MRET_0263), partial mRNA blastn 478 448 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
11223571 11223571 PRJNA1103784_P_NODE_1389_length_430_cov_1.159664_g1334_i0 PRJNA1103784 1389 430 1.159664 4.9865552 Malassezia 55193 Fungi Fungi 789 0   NTclustered gi|1321659621|gb|KY911094.1| 76775 g1334 i0 99.767 44.9697674418605 430 1 100 0 1 430 1757 1328 Malassezia restricta mitochondrion, complete genome blastn 19337 789 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
13773511 13773511 PRJNA1103784_P_NODE_3831_length_286_cov_7.704225_g3776_i0 PRJNA1103784 3831 286 7.704225 22.0340835 Fungi 4751 Fungi Fungi 523 4.659999999999998e-144   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g3776 i0 99.65 105.944055944056 286 1 100 0 1 286 2690 2405 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 30300 523 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
13773526 13773526 PRJNA1103784_P_NODE_911_length_517_cov_1.292793_g856_i0 PRJNA1103784 911 517 1.292793 6.68373981 Boletaceae 5368 Fungi Fungi 60.2 3.03e-4   NTclustered gi|2166981937|gb|MZ261925.1| 121045 g856 i0 84.127 1.96131528046422 63 8 12 2 445 506 12248 12187 Hemileccinum impolitum mitochondrion, complete genome blastn 1014 60.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales Boletaceae Hemileccinum Hemileccinum impolitum
19337940 19337940 PRJNA1103784_P_NODE_456_length_697_cov_3.184295_g403_i0 PRJNA1103784 456 697 3.184295 22.19453615 Fungi 4751 Fungi Fungi 311 2.22e-103   NR KAJ3564534.1 56174 g403 i0 66.5 25.9670014347202 215 72 92.5 0 684 40 83 297 KAJ3564534.1 hypothetical protein NP233_g8232 [Leucocoprinus birnbaumii] diamond 18099 314 0.990445859872611 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Agaricaceae Leucocoprinus Leucocoprinus birnbaumii
19337997 19337997 PRJNA1103784_P_NODE_7416_length_243_cov_0.905882_g7361_i0 PRJNA1103784 7416 243 0.905882 2.20129326 Malassezia sympodialis 76777 Fungi Fungi 154 5.84e-33   NTclustered gi|1092930699|ref|XM_018885006.1| 1230383 g7361 i0 82.659 27.4362139917695 173 30 71 0 71 243 190 362 Malassezia sympodialis ATCC 42132 uncharacterized protein (MSY001_3116), partial mRNA blastn 6667 154 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia sympodialis
20613338 20613338 PRJNA1103784_P_NODE_6217_length_248_cov_1.062857_g6162_i0 PRJNA1103784 6217 248 1.062857 2.63588536 Malassezia globosa 76773 Fungi Fungi 420 5.34e-113   NTclustered gi|1805972860|gb|CP046440.1| 76773 g6162 i0 97.177 83 248 7 100 0 1 248 2764 2517 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 20584 420 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
21888935 21888935 PRJNA1103784_P_NODE_4298_length_276_cov_1.364532_g4243_i0 PRJNA1103784 4298 276 1.364532 3.76610832 Malassezia globosa 76773 Fungi Fungi 505 1.62e-138   NTclustered gi|1805972860|gb|CP046440.1| 76773 g4243 i0 99.638 18.7608695652174 276 1 100 0 1 276 330 605 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 5178 505 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
21888974 21888974 PRJNA1103784_P_NODE_7238_length_243_cov_2.264706_g7183_i0 PRJNA1103784 7238 243 2.264706 5.50323558 Schizopora paradoxa 27342 Fungi Fungi 99.4 6.929999999999999e-23   NR KLO06104.1 27342 g7183 i0 65.4 4.65432098765432 78 27 96.3 0 10 243 70 147 KLO06104.1 large subunit ribosomal protein LP0 [Schizopora paradoxa] diamond 1131 99.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Hymenochaetales Schizoporaceae Schizopora Schizopora paradoxa
23972459 23972459 PRJNA1103784_P_NODE_3079_length_311_cov_2.432773_g3024_i0 PRJNA1103784 3079 311 2.432773 7.56592403 Trametes 5324 Fungi Fungi 575 1.3899999999999995e-159   NTclustered gi|2673161145|dbj|LC798859.1| 5327 g3024 i0 100 98.3376205787781 311 0 100 0 1 311 953 1263 Trametes hirsuta IFM 65545 genes for small subunit ribosomal RNA, ITS1, 5.8S ribosomal RNA, ITS2 and large subunit ribosomal RNA, partial and complete sequence blastn 30583 575 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Trametes Trametes hirsuta
28195847 28195847 PRJNA1103784_P_NODE_766_length_559_cov_1.899177_g712_i0 PRJNA1103784 766 559 1.899177 10.61639943 Fungi 4751 Fungi Fungi 146 4.56e-41   NR GAA6020434.1 86839 g712 i0 44.7 10.0626118067979 170 90 91.2 2 24 533 1 166 GAA6020434.1 hypothetical protein JCM8202_000069 [Rhodotorula sphaerocarpa] diamond 5625 147 0.993197278911565 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula sphaerocarpa
29656698 29656698 PRJNA1103784_P_NODE_3690_length_289_cov_3.032407_g3635_i0 PRJNA1103784 3690 289 3.032407 8.76365623 Cantharellus anzutake 1750568 Fungi Fungi 86.3 4.75e-18   NR XP_038917079.1 1750568 g3635 i0 45.7 2.63667820069204 94 47 97.6 1 287 6 157 246 XP_038917079.1 40S ribosomal protein S1 [Cantharellus anzutake] diamond 762 86.3 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Hydnaceae Cantharellus Cantharellus anzutake
30130531 30130531 PRJNA1103784_P_NODE_4952_length_264_cov_1.167539_g4897_i0 PRJNA1103784 4952 264 1.167539 3.08230296 Malassezia pachydermatis 77020 Fungi Fungi 102 6.61e-23   NR XP_017990559.1 77020 g4897 i0 91.1 1.375 56 5 63.6 0 171 4 340 395 XP_017990559.1 hypothetical protein Malapachy_0576 [Malassezia pachydermatis] diamond 363 102 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia pachydermatis
31742700 31742700 PRJNA1103784_P_NODE_5657_length_251_cov_0.865169_g5602_i0 PRJNA1103784 5657 251 0.865169 2.17157419 Vararia minispora EC-137 1314806 Fungi Fungi 63.2 5.09e-10   NR KAI0036451.1 1314806 g5602 i0 52.2 0.800796812749004 67 15 80.1 1 1 201 100 149 KAI0036451.1 copper zinc superoxide dismutase, partial [Vararia minispora EC-137] diamond 201 63.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Lachnocladiaceae Vararia Vararia minispora
32303913 32303913 PRJNA1103784_P_NODE_4019_length_282_cov_1.373206_g3964_i0 PRJNA1103784 4019 282 1.373206 3.87244092 Opisthokonta 33154 Fungi Fungi 137 7.199999999999999e-36   NR XP_052943822.1 4972 g3964 i0 71 26.6914893617021 93 27 98.9 0 280 2 394 486 XP_052943822.1 HAD-like domain-containing protein [Dioszegia hungarica] diamond 7527 138 0.992753623188406 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Dioszegia Dioszegia hungarica
32565741 32565741 PRJNA1103784_P_NODE_5419_length_254_cov_2.314917_g5364_i0 PRJNA1103784 5419 254 2.314917 5.87988918 Rhodotorula toruloides NP11 1130832 Fungi Fungi 51.6 9.32e-6   NR XP_016275084.1 1130832 g5364 i0 43.1 0.767716535433071 65 34 76.8 1 228 34 84 145 XP_016275084.1 nascent polypeptide-associated complex subunit alpha [Rhodotorula toruloides NP11] diamond 195 51.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula toruloides

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;