RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1103784", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1103784 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29372971 29372971 PRJNA1103784_P_NODE_7229_length_243_cov_3.158824_g7174_i0 PRJNA1103784 7229 243 3.158824 7.67594232 Bellilinea sp. 2838785 Bacteria Bacteria 82.8 2.93e-16   NR WP_322792535.1 2838785 g7174 i0 48.1 1.91358024691358 79 40 97.5 1 3 239 477 554 WP_322792535.1 NBR1-Ig-like domain-containing protein [Bellilinea sp.] diamond 465 82.8 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Bellilinea Bellilinea sp.
30785654 30785654 PRJNA1103784_P_NODE_334_length_817_cov_1.963710_g285_i0 PRJNA1103784 334 817 1.96371 16.0435107 Bacillati 1783272 Bacteria Bacteria 48.9 0.0047   NR HLZ57354.1 2692419 g285 i0 24.3 0.899632802937577 144 92 48.5 4 149 544 39 177 HLZ57354.1 hypothetical protein [Ktedonosporobacter sp.] diamond 735 48.9 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales Ktedonosporobacteraceae Ktedonosporobacter Ktedonosporobacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;