RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1103784", tax_clade = "Haptista" and tax_phylum = "Haptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Haptophyta · 2 ✖

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJNA1103784 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27447167 27447167 PRJNA1103784_P_NODE_343_length_806_cov_2.637108_g294_i0 PRJNA1103784 343 806 2.637108 21.25509048 Diacronema lutheri 2081491 Haptophyta other_Eukaryota 298 1.51e-97   NR KAG8462884.1 2081491 g294 i0 60.7 4.79776674937965 252 99 93.8 0 801 46 65 316 KAG8462884.1 hypothetical protein KFE25_001657 [Diacronema lutheri] diamond 3867 298 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri
30667975 30667975 PRJNA1103784_P_NODE_4773_length_267_cov_1.190722_g4718_i0 PRJNA1103784 4773 267 1.190722 3.17922774 Prymnesium sp. 2812485 Haptophyta other_Eukaryota 50.4 9.38e-5   NR KAL3929874.1 2812485 g4718 i0 32.6 0.966292134831461 86 54 95.5 2 264 10 227 309 KAL3929874.1 MAG: hypothetical protein SGPRY_001772 [Prymnesium sp.] diamond 258 50.4 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;