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contig_metadata

26 rows where bioproject = "PRJNA1103784" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 26 ✖

bioproject 1

  • PRJNA1103784 · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
212130 212130 PRJNA1103784_P_NODE_1801_length_388_cov_1.222222_g1746_i0 PRJNA1103784 1801 388 1.222222 4.74222136 Cochliopodium minus 313997 Discosea other_Eukaryota 383 1.1599999999999998e-101   NTclustered gi|330902862|gb|JF298257.1| 313997 g1746 i0 90.847 28.6701030927835 295 13 73 9 104 388 1756 1466 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 11124 383 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
1486803 1486803 PRJNA1103784_P_NODE_3582_length_292_cov_1.406393_g3527_i0 PRJNA1103784 3582 292 1.406393 4.10666756 Cribraria violacea 1334538 Evosea other_Eukaryota 265 3.19e-66   NTclustered gi|501417113|gb|JX481322.1| 1334538 g3527 i0 84.815 79.208904109589 270 33 91 7 26 291 763 498 Cribraria violacea voucher AMFD172 elongation factor 1A (EF1A) gene, partial cds blastn 23129 265 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Liceales Cribrariaceae Cribraria Cribraria violacea
2762789 2762789 PRJNA1103784_P_NODE_1383_length_431_cov_1.407821_g1328_i0 PRJNA1103784 1383 431 1.407821 6.06770851 Cochliopodium minus 313997 Discosea other_Eukaryota 326 2.22e-84   NTclustered gi|330902862|gb|JF298257.1| 313997 g1328 i0 87.671 8.67285382830626 292 21 67 12 1 288 284 4 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 3738 326 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
4038942 4038942 PRJNA1103784_P_NODE_6984_length_245_cov_0.895349_g6929_i0 PRJNA1103784 6984 245 0.895349 2.19360505 Cochliopodium minus 313997 Discosea other_Eukaryota 405 1.47e-108   NTclustered gi|330902895|gb|JF298272.1| 313997 g6929 i0 96.708 63.0040816326531 243 8 99 0 3 245 774 532 Cochliopodium minus clone 5207 actin gene, partial cds blastn 15436 405 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
7864813 7864813 PRJNA1103784_P_NODE_2247_length_356_cov_11.038869_g2192_i0 PRJNA1103784 2247 356 11.038869 39.29837364 Ripella sp. 805 1217113 Discosea other_Eukaryota 556 5.86e-154   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g2192 i0 95.506 100.120786516854 356 2 100 6 1 356 901 560 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 35643 556 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
11690895 11690895 PRJNA1103784_P_NODE_90_length_1429_cov_3.897493_g64_i0 PRJNA1103784 90 1429 3.897493 55.69517497 Vannella septentrionalis 197531 Discosea other_Eukaryota 261 2.24e-64   NTclustered gi|300078499|gb|GU001161.1| 197531 g64 i0 76.493 21.4373687893632 536 92 37 27 145 671 1785 2295 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 30634 261 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
16789227 16789227 PRJNA1103784_P_NODE_1974_length_373_cov_1.746667_g1919_i0 PRJNA1103784 1974 373 1.746667 6.51506791 Cochliopodium minus 313997 Discosea other_Eukaryota 558 1.72e-154   NTclustered gi|330902862|gb|JF298257.1| 313997 g1919 i0 93.473 59.5120643431635 383 12 99 6 1 372 242 622 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 22198 558 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
16789341 16789341 PRJNA1103784_P_NODE_914_length_515_cov_8.877828_g859_i0 PRJNA1103784 914 515 8.877828 45.7208142 Ripella sp. 805 1217113 Discosea other_Eukaryota 798 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g859 i0 95.117 99.1980582524272 512 16 99 9 8 515 1 507 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 51087 798 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
26783033 26783033 PRJNA1103784_P_NODE_6201_length_248_cov_1.388571_g6146_i0 PRJNA1103784 6201 248 1.388571 3.44365608 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 64.7 7.21e-10   NR XP_643949.1 352472 g6146 i0 47.6 0.762096774193548 63 33 76.2 0 192 4 171 233 XP_643949.1 hypothetical protein DDB_G0274325 [Dictyostelium discoideum AX4] diamond 189 64.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
27857306 27857306 PRJNA1103784_P_NODE_4505_length_272_cov_1.281407_g4450_i0 PRJNA1103784 4505 272 1.281407 3.48542704 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 83.2 1.23e-16   NR XP_004352561.1 1257118 g4450 i0 43.8 0.981617647058823 89 50 98.2 0 268 2 212 300 XP_004352561.1 EF hand domain containing protein [Acanthamoeba castellanii str. Neff] diamond 267 83.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28394066 28394066 PRJNA1103784_P_NODE_5886_length_250_cov_0.870056_g5831_i0 PRJNA1103784 5886 250 0.870056 2.17514 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 100 5.02e-23   NR XP_012756598.1 1410327 g5831 i0 58.5 0.984 82 30 98.4 1 249 4 183 260 XP_012756598.1 hypothetical protein SAMD00019534_030110 [Acytostelium subglobosum LB1] diamond 246 100 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
28488914 28488914 PRJNA1103784_P_NODE_4147_length_279_cov_1.470874_g4092_i0 PRJNA1103784 4147 279 1.470874 4.10373846 Heterostelium album PN5 2086695 Evosea other_Eukaryota 64.3 1.41e-9   NR XP_020428762.1 670386 g4092 i0 37 1.73118279569892 81 51 87.1 0 245 3 383 463 XP_020428762.1 dynactin 50 kDa subunit [Heterostelium album PN500] diamond 483 64.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
28678469 28678469 PRJNA1103784_P_NODE_7347_length_243_cov_0.905882_g7292_i0 PRJNA1103784 7347 243 0.905882 2.20129326 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 42.7 0.0369   NR XP_012752371.1 1410327 g7292 i0 34.7 0.888888888888889 72 32 88.9 1 226 11 304 360 XP_012752371.1 hypothetical protein SAMD00019534_078770 [Acytostelium subglobosum LB1] diamond 216 42.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
28954000 28954000 PRJNA1103784_P_NODE_7068_length_244_cov_0.912281_g7013_i0 PRJNA1103784 7068 244 0.912281 2.22596564 root 1 Root_unresolved Root_unresolved 105 4.59e-25   NR XP_643167.1 352472 g7013 i0 59.3 4.95491803278689 81 33 99.6 0 243 1 240 320 XP_643167.1 NAD-dependent epimerase/dehydratase family protein [Dictyostelium discoideum AX4] diamond 1209 105 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
29341458 29341458 PRJNA1103784_P_NODE_1569_length_410_cov_1.451039_g1514_i0 PRJNA1103784 1569 410 1.451039 5.9492599 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 117 9.19e-29   NR KYQ89807.1 361077 g1514 i0 46.9 5.49512195121951 128 61 93.7 2 26 409 15 135 KYQ89807.1 hypothetical protein DLAC_09777 [Tieghemostelium lacteum] diamond 2253 117 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
30058824 30058824 PRJNA1103784_P_NODE_7811_length_241_cov_0.916667_g7756_i0 PRJNA1103784 7811 241 0.916667 2.20916747 Eumycetozoa 142796 Evosea other_Eukaryota 60.5 1.19e-8   NR XP_635380.1 352472 g7756 i0 54.9 2.06639004149378 51 23 63.5 0 154 2 26 76 XP_635380.1 NADH dehydrogenase [Dictyostelium discoideum AX4] diamond 498 60.8 0.995065789473684 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
30469930 30469930 PRJNA1103784_P_NODE_3933_length_284_cov_1.393365_g3878_i0 PRJNA1103784 3933 284 1.393365 3.9571566 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 97.8 1.58e-21   NR XP_004350597.1 261658 g3878 i0 50.5 3.84507042253521 93 43 98.2 1 283 5 74 163 XP_004350597.1 oxysterol binding family protein [Cavenderia fasciculata] diamond 1092 97.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
31268422 31268422 PRJNA1103784_P_NODE_5435_length_254_cov_1.657459_g5380_i0 PRJNA1103784 5435 254 1.657459 4.20994586 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 109 1.19e-25   NR PRP80096.1 1890364 g5380 i0 60.5 0.897637795275591 76 30 89.8 0 230 3 619 694 PRP80096.1 glycosyltransferase, CAZy family GT4 [Planoprotostelium fungivorum] diamond 228 109 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31417800 31417800 PRJNA1103784_P_NODE_5396_length_255_cov_1.269231_g5341_i0 PRJNA1103784 5396 255 1.269231 3.23653905 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 110 1.7e-26   NR XP_643401.2 352472 g5341 i0 67.9 1.88235294117647 78 24 90.6 1 255 25 205 282 XP_643401.2 S-adenosylmethionine decarboxylase [Dictyostelium discoideum AX4] diamond 480 110 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
31647746 31647746 PRJNA1103784_P_NODE_3877_length_285_cov_2.344340_g3822_i0 PRJNA1103784 3877 285 2.34434 6.681369 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 105 1.14e-26   NR XP_004348720.1 1257118 g3822 i0 58.5 0.863157894736842 82 34 86.3 0 10 255 47 128 XP_004348720.1 actin binding protein [Acanthamoeba castellanii str. Neff] diamond 246 105 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31711220 31711220 PRJNA1103784_P_NODE_6197_length_248_cov_1.428571_g6142_i0 PRJNA1103784 6197 248 1.428571 3.54285608 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 80.9 1.77e-16   NR XP_643135.1 352472 g6142 i0 51.4 0.895161290322581 74 36 89.5 0 13 234 148 221 XP_643135.1 hypothetical protein DDB_G0276479 [Dictyostelium discoideum AX4] diamond 222 80.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
31892259 31892259 PRJNA1103784_P_NODE_1717_length_396_cov_1.191950_g1662_i0 PRJNA1103784 1717 396 1.19195 4.720122 root 1 Root_unresolved Root_unresolved 182 1.41e-52   NR PRP82528.1 1890364 g1662 i0 68.8 2.91666666666667 128 40 97 0 394 11 303 430 PRP82528.1 L-lysine 6-transaminase [Planoprotostelium fungivorum] diamond 1155 182 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31900988 31900988 PRJNA1103784_P_NODE_7897_length_240_cov_2.305389_g7842_i0 PRJNA1103784 7897 240 2.305389 5.5329336 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 119 4.43e-29   NR PRP72804.1 1890364 g7842 i0 63.6 0.9625 77 27 95 1 235 8 241 317 PRP72804.1 hypothetical protein PROFUN_07704 [Planoprotostelium fungivorum] diamond 231 119 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32493631 32493631 PRJNA1103784_P_NODE_3899_length_285_cov_1.283019_g3844_i0 PRJNA1103784 3899 285 1.283019 3.65660415 root 1 Root_unresolved Root_unresolved 43.5 0.0328   NR PRP83486.1 1890364 g3844 i0 42.2 2.10526315789474 64 27 66.3 3 93 281 315 369 PRP83486.1 hypothetical protein PROFUN_04360 [Planoprotostelium fungivorum] diamond 600 43.5 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32817327 32817327 PRJNA1103784_P_NODE_5840_length_250_cov_0.870056_g5785_i0 PRJNA1103784 5840 250 0.870056 2.17514 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 68.6 8.1e-12   NR XP_012748052.1 1410327 g5785 i0 45.3 3.54 75 41 90 0 233 9 121 195 XP_012748052.1 hypothetical protein SAMD00019534_122220, partial [Acytostelium subglobosum LB1] diamond 885 68.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
32817328 32817328 PRJNA1103784_P_NODE_7460_length_242_cov_2.278107_g7405_i0 PRJNA1103784 7460 242 2.278107 5.51301894 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 55.5 2.47e-7   NR KYR02504.1 361077 g7405 i0 39 1.93388429752066 77 40 95.5 3 11 241 23 92 KYR02504.1 actin binding protein [Tieghemostelium lacteum] diamond 468 55.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;