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contig_metadata

24 rows where bioproject = "PRJNA1102048", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 24 ✖

tax_phylum 1

  • Bdellovibrionota · 24 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1102048 · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4038550 4038550 PRJNA1102048_P_NODE_8264_length_302_cov_3.148472_g8160_i0 PRJNA1102048 8264 302 3.148472 9.50838544 Bdellovibrio reynosensis 2835041 Bacteria Bacteria 494 3.89e-135   NTclustered gi|2216477995|gb|CP093442.1| 2835041 g8160 i0 96.333 332.23178807947 300 11 99 0 1 300 953163 952864 Bdellovibrio reynosensis strain LBG001 chromosome, complete genome blastn 100334 494 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio reynosensis
16322498 16322498 PRJNA1102048_P_NODE_6093_length_350_cov_1.111913_g5989_i0 PRJNA1102048 6093 350 1.111913 3.8916955 Bdellovibrio 958 Bacteria Bacteria 636 7.18e-178   NTclustered gi|2800924434|gb|CP168967.1| 959 g5989 i0 99.429 181.722857142857 350 2 100 0 1 350 784147 783798 Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome blastn 63603 636 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
20612947 20612947 PRJNA1102048_P_NODE_3097_length_479_cov_2.652709_g2993_i0 PRJNA1102048 3097 479 2.652709 12.70647611 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 122 1.49e-32   NR MCB0368029.1 2053517 g2993 i0 56.1 0.670146137787056 107 46 66.4 1 478 161 18 124 MCB0368029.1 hypothetical protein [Bdellovibrionales bacterium] diamond 321 122 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
24437614 24437614 PRJNA1102048_P_NODE_15080_length_246_cov_0.890173_g14976_i0 PRJNA1102048 15080 246 0.890173 2.18982558 Bacteriovoracales 2024979 Bacteria Bacteria 160 2.1e-44   NR MAF76598.1 2026745 g14976 i0 98.8 1.97560975609756 81 1 98.8 0 244 2 194 274 MAF76598.1 30S ribosomal protein S1 [Halobacteriovoraceae bacterium] diamond 486 160 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Halobacteriovoraceae   Halobacteriovoraceae bacterium
25246337 25246337 PRJNA1102048_P_NODE_10540_length_272_cov_1.547739_g10436_i0 PRJNA1102048 10540 272 1.547739 4.20985008 Bacteriovorax 146784 Bacteria Bacteria 166 1.6299999999999996e-47   NR MDD4972878.1 2608087 g10436 i0 85.6 16.8419117647059 90 13 99.3 0 272 3 5 94 MDD4972878.1 isocitrate dehydrogenase (NADP(+)) [Bacteriovorax sp.] diamond 4581 166 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax sp.
26805770 26805770 PRJNA1102048_P_NODE_17081_length_242_cov_0.911243_g16977_i0 PRJNA1102048 17081 242 0.911243 2.20520806 Pseudomonadati 3379134 Bacteria Bacteria 150 1.3899999999999996e-43   NR MBD65938.1 2026745 g16977 i0 92.5 12.8925619834711 80 6 99.2 0 3 242 119 198 MBD65938.1 arsenical resistance protein ArsH [Halobacteriovoraceae bacterium] diamond 3120 151 0.993377483443709 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Halobacteriovoraceae   Halobacteriovoraceae bacterium
26878095 26878095 PRJNA1102048_P_NODE_13421_length_250_cov_0.870056_g13317_i0 PRJNA1102048 13421 250 0.870056 2.17514 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 50.4 7.53e-5   NR MEC7276116.1 3034175 g13317 i0 75 0.336 28 7 33.6 0 249 166 334 361 MEC7276116.1 saccharopine dehydrogenase [Bdellovibrionota bacterium] diamond 84 50.4 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
28109807 28109807 PRJNA1102048_P_NODE_2225_length_549_cov_7.161765_g2123_i0 PRJNA1102048 2225 549 7.161765 39.31808985 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 70.9 1.63e-11   NR MCB0369154.1 2053517 g2123 i0 30.7 0.748633879781421 137 89 74.9 2 506 96 3 133 MCB0369154.1 C39 family peptidase [Bdellovibrionales bacterium] diamond 411 70.9 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28488904 28488904 PRJNA1102048_P_NODE_5887_length_355_cov_2.730496_g5783_i0 PRJNA1102048 5887 355 2.730496 9.6932608 Bacteriovorax sp. 2608087 Bacteria Bacteria 158 1.01e-44   NR MBP9680396.1 2608087 g5783 i0 72 3.56619718309859 107 30 90.4 0 327 7 8 114 MBP9680396.1 adenosine kinase [Bacteriovorax sp.] diamond 1266 158 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax sp.
29246558 29246558 PRJNA1102048_P_NODE_17209_length_242_cov_0.911243_g17105_i0 PRJNA1102048 17209 242 0.911243 2.20520806 Halobacteriovoraceae bacterium 2026745 Bacteria Bacteria 116 4.45e-32   NR MBT3583655.1 2026745 g17105 i0 79.7 0.793388429752066 64 13 79.3 0 1 192 9 72 MBT3583655.1 hypothetical protein [Halobacteriovoraceae bacterium] diamond 192 116 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Halobacteriovoraceae   Halobacteriovoraceae bacterium
29372942 29372942 PRJNA1102048_P_NODE_13129_length_250_cov_0.870056_g13025_i0 PRJNA1102048 13129 250 0.870056 2.17514 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 76.3 1.64e-15   NR MEE2671064.1 3034175 g13025 i0 43.9 0.984 82 41 98.4 2 249 4 15 91 MEE2671064.1 VOC family protein [Bdellovibrionota bacterium] diamond 246 76.3 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
30153492 30153492 PRJNA1102048_P_NODE_12872_length_251_cov_0.865169_g12768_i0 PRJNA1102048 12872 251 0.865169 2.17157419 Bacteria 2 Bacteria Bacteria 120 2.55e-29   NR MCF8057649.1 2081706 g12768 i0 68.7 1.99601593625498 83 25 98 1 251 6 379 461 MCF8057649.1 hypothetical protein [Bacteriovoracaceae bacterium] diamond 501 121 0.991735537190083 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
30289218 30289218 PRJNA1102048_P_NODE_17492_length_241_cov_1.255952_g17388_i0 PRJNA1102048 17492 241 1.255952 3.02684432 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 116 1.7399999999999999e-31   NR MCB0370182.1 2053517 g17388 i0 76 3.78423236514523 75 18 93.4 0 241 17 43 117 MCB0370182.1 hypothetical protein [Bdellovibrionales bacterium] diamond 912 116 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30384024 30384024 PRJNA1102048_P_NODE_10473_length_273_cov_1.415000_g10369_i0 PRJNA1102048 10473 273 1.415 3.86295 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 113 1.8000000000000002e-28   NR MBX9767866.1 2053517 g10369 i0 63.3 0.989010989010989 90 33 98.9 0 273 4 68 157 MBX9767866.1 GTP-binding protein [Bdellovibrionales bacterium] diamond 270 113 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30384034 30384034 PRJNA1102048_P_NODE_16753_length_243_cov_0.905882_g16649_i0 PRJNA1102048 16753 243 0.905882 2.20129326 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 136 4.82e-38   NR MEC7276380.1 3034175 g16649 i0 78.8 0.987654320987654 80 17 98.8 0 2 241 144 223 MEC7276380.1 class I SAM-dependent methyltransferase [Bdellovibrionota bacterium] diamond 240 136 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
30509969 30509969 PRJNA1102048_P_NODE_15073_length_246_cov_0.890173_g14969_i0 PRJNA1102048 15073 246 0.890173 2.18982558 Silvanigrellales bacterium 2767476 Bacteria Bacteria 59.7 1.68e-9   NR MCA2959144.1 2767476 g14969 i0 69.8 0.524390243902439 43 13 52.4 0 117 245 11 53 MCA2959144.1 30S ribosomal protein S15 [Silvanigrellales bacterium] diamond 129 59.7 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Silvanigrellales     Silvanigrellales bacterium
30572940 30572940 PRJNA1102048_P_NODE_17833_length_241_cov_0.916667_g17729_i0 PRJNA1102048 17833 241 0.916667 2.20916747 Bdellovibrionales bacterium RIFOXYD1_FULL_44_7 1797402 Bacteria Bacteria 55.5 1.16e-7   NR OFZ75141.1 1797402 g17729 i0 47.3 0.684647302904564 55 29 68.5 0 209 45 4 58 OFZ75141.1 MAG: heme biosynthesis protein HemY [Bdellovibrionales bacterium RIFOXYD1_FULL_44_7] diamond 165 55.5 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium RIFOXYD1_FULL_44_7
30943797 30943797 PRJNA1102048_P_NODE_1414_length_646_cov_1.570681_g1314_i0 PRJNA1102048 1414 646 1.570681 10.14659926 Bdellovibrionota 3018035 Bacteria Bacteria 231 9.11e-72   NR WP_142409471.1 960 g1314 i0 70.2 2.3359133126935 168 50 78 0 646 143 161 328 WP_142409471.1 adenosine kinase [Bacteriovorax stolpii] diamond 1509 233 0.991416309012876 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax stolpii
31078883 31078883 PRJNA1102048_P_NODE_7095_length_325_cov_1.222222_g6991_i0 PRJNA1102048 7095 325 1.222222 3.9722215 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 148 1.06e-40   NR MEC7278021.1 3034175 g6991 i0 67.9 1.00615384615385 109 34 99.7 1 2 325 254 362 MEC7278021.1 PQQ-binding-like beta-propeller repeat protein [Bdellovibrionota bacterium] diamond 327 148 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
31173186 31173186 PRJNA1102048_P_NODE_13415_length_250_cov_0.870056_g13311_i0 PRJNA1102048 13415 250 0.870056 2.17514 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 141 2.09e-37   NR MEC7277924.1 3034175 g13311 i0 80.7 0.996 83 16 99.6 0 1 249 315 397 MEC7277924.1 murein biosynthesis integral membrane protein MurJ [Bdellovibrionota bacterium] diamond 249 141 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
31521532 31521532 PRJNA1102048_P_NODE_16156_length_244_cov_0.900585_g16052_i0 PRJNA1102048 16156 244 0.900585 2.1974274 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 144 1.87e-39   NR MEC7275041.1 3034175 g16052 i0 83.8 0.983606557377049 80 13 98.4 0 240 1 226 305 MEC7275041.1 hypothetical protein [Bdellovibrionota bacterium] diamond 240 144 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
32565706 32565706 PRJNA1102048_P_NODE_12939_length_251_cov_0.865169_g12835_i0 PRJNA1102048 12939 251 0.865169 2.17157419 Halobacteriovoraceae bacterium 2026745 Bacteria Bacteria 109 5.630000000000001e-27   NR MBC97755.1 2026745 g12835 i0 95.3 0.764940239043825 64 3 76.5 0 2 193 214 277 MBC97755.1 flagellin FliC [Halobacteriovoraceae bacterium] diamond 192 109 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Halobacteriovoraceae   Halobacteriovoraceae bacterium
32597037 32597037 PRJNA1102048_P_NODE_13060_length_250_cov_1.700565_g12956_i0 PRJNA1102048 13060 250 1.700565 4.2514125 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 117 2.96e-30   NR MBX9767866.1 2053517 g12956 i0 61 0.984 82 32 98.4 0 2 247 166 247 MBX9767866.1 GTP-binding protein [Bdellovibrionales bacterium] diamond 246 117 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32848783 32848783 PRJNA1102048_P_NODE_880_length_778_cov_5.204255_g788_i0 PRJNA1102048 880 778 5.204255 40.4891039 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 319 1.7399999999999995e-107   NR MBX9767865.1 2053517 g788 i0 89.6 0.667095115681234 173 18 66.7 0 260 778 1 173 MBX9767865.1 hypothetical protein [Bdellovibrionales bacterium] diamond 519 319 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;