RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1102048", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 3 ✖

tax_kingdom 1

  • Methanobacteriati · 3 ✖

bioproject 1

  • PRJNA1102048 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27825902 27825902 PRJNA1102048_P_NODE_4464_length_404_cov_1.280967_g4360_i0 PRJNA1102048 4464 404 1.280967 5.17510668 Thermoplasmatota archaeon 2806419 Archaea Archaea 98.6 3.77e-21   NR MBN2602997.1 2806419 g4360 i0 49.4 1.76732673267327 83 42 61.6 0 398 150 349 431 MBN2602997.1 polyamine aminopropyltransferase [Thermoplasmatota archaeon] diamond 714 98.6 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
28962688 28962688 PRJNA1102048_P_NODE_11748_length_259_cov_2.263441_g11644_i0 PRJNA1102048 11748 259 2.263441 5.86231219 Thermoplasmata archaeon 1906666 Archaea Archaea 114 1.02e-27   NR RLF35890.1 1906666 g11644 i0 64.3 1.93436293436293 84 30 97.3 0 3 254 240 323 RLF35890.1 MAG: spermidine synthase [Thermoplasmata archaeon] diamond 501 114 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30880410 30880410 PRJNA1102048_P_NODE_14974_length_246_cov_1.450867_g14870_i0 PRJNA1102048 14974 246 1.450867 3.56913282 root 1 Root_unresolved Root_unresolved 58.2 1.31e-7   NR WP_171481123.1 74969 g14870 i0 43.2 13.7926829268293 81 32 98.8 3 3 245 242 308 WP_171481123.1 4-hydroxyphenylpyruvate dioxygenase [Ferroplasma acidiphilum] diamond 3393 58.5 0.994871794871795 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales Ferroplasmaceae Ferroplasma Ferroplasma acidiphilum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;