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contig_metadata

28 rows where bioproject = "PRJNA1102048", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 28 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 28 ✖

bioproject 1

  • PRJNA1102048 · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1486371 1486371 PRJNA1102048_P_NODE_162_length_1424_cov_4.319763_g123_i0 PRJNA1102048 162 1424 4.319763 61.51342512 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 289 3.7999999999999997e-90   NR RYD71398.1 2026800 g123 i0 44.8 0.747893258426966 355 183 73.5 6 1330 284 14 361 RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] diamond 1065 289 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
3570510 3570510 PRJNA1102048_P_NODE_13383_length_250_cov_0.870056_g13279_i0 PRJNA1102048 13383 250 0.870056 2.17514 Verrucomicrobiota 74201 Bacteria Bacteria 228 3.4999999999999995e-55   NTclustered gi|183579829|emb|AM905426.1| 320771 g13279 i0 83.2 80.976 250 41 100 1 1 250 451 203 Bacterium Ellin514 23S rRNA gene, isolate Ellin514 blastn 20244 230 0.991304347826087 Bacteria PVC group Pseudomonadati Verrucomicrobiota Pedosphaerae Pedosphaerales Pedosphaeraceae Pedosphaera Pedosphaera parvula
15047683 15047683 PRJNA1102048_P_NODE_172_length_1377_cov_10.654141_g132_i0 PRJNA1102048 172 1377 10.654141 146.70752157 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 434 1.7e-147   NR RYD65414.1 2026800 g132 i0 76.3 0.616557734204793 283 65 61.7 1 340 1188 56 336 RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] diamond 849 434 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
24437692 24437692 PRJNA1102048_P_NODE_8700_length_294_cov_2.787330_g8596_i0 PRJNA1102048 8700 294 2.78733 8.1947502 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 64.3 1.87e-9   NR MES2709712.1 2026799 g8596 i0 61.3 0.63265306122449 62 21 60.2 2 4 180 436 497 MES2709712.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 186 64.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27952111 27952111 PRJNA1102048_P_NODE_14065_length_248_cov_0.880000_g13961_i0 PRJNA1102048 14065 248 0.88 2.1824 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 114 3.56e-27   NR MDA1275818.1 2026799 g13961 i0 63.4 0.991935483870968 82 30 99.2 0 3 248 506 587 MDA1275818.1 beta-propeller fold lactonase family protein [Verrucomicrobiota bacterium] diamond 246 114 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28172989 28172989 PRJNA1102048_P_NODE_15886_length_244_cov_2.549708_g15782_i0 PRJNA1102048 15886 244 2.549708 6.22128752 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 50.1 9.89e-5   NR MDA1044870.1 2026799 g15782 i0 35.7 1.63524590163934 70 44 86.1 1 240 31 468 536 MDA1044870.1 DNRLRE domain-containing protein [Verrucomicrobiota bacterium] diamond 399 50.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28267647 28267647 PRJNA1102048_P_NODE_8186_length_304_cov_1.333333_g8082_i0 PRJNA1102048 8186 304 1.333333 4.05333232 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 50.8 1.06e-4   NR MBI3848753.1 2026799 g8082 i0 35.5 1.05592105263158 107 51 92.8 3 23 304 58 159 MBI3848753.1 exo-alpha-sialidase [Verrucomicrobiota bacterium] diamond 321 50.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28615217 28615217 PRJNA1102048_P_NODE_4227_length_414_cov_2.307918_g4123_i0 PRJNA1102048 4227 414 2.307918 9.55478052 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 48.5 0.00226   NR PYI73286.1 2026799 g4123 i0 36.3 0.579710144927536 80 47 58 1 151 390 253 328 PYI73286.1 MAG: hypothetical protein DMF02_01365, partial [Verrucomicrobiota bacterium] diamond 240 48.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28741446 28741446 PRJNA1102048_P_NODE_547_length_926_cov_45.917937_g473_i0 PRJNA1102048 547 926 45.917937 425.20009662 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 263 8.99e-84   NR HEY6205988.1 2201154 g473 i0 57.3 9.71922246220302 255 105 82.3 3 824 63 1 252 HEY6205988.1 glucose 1-dehydrogenase [Chthoniobacterales bacterium] diamond 9000 263 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
29174974 29174974 PRJNA1102048_P_NODE_16089_length_244_cov_0.900585_g15985_i0 PRJNA1102048 16089 244 0.900585 2.1974274 Pseudomonadati 3379134 Bacteria Bacteria 107 7.37e-25   NR OYV47795.1 1970609 g15985 i0 78.1 9.31967213114754 64 14 78.7 0 8 199 485 548 OYV47795.1 MAG: hypothetical protein B7X06_02630 [Verrucomicrobia bacterium 21-51-4] diamond 2274 107 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobia bacterium 21-51-4
29372940 29372940 PRJNA1102048_P_NODE_11109_length_266_cov_1.450777_g11005_i0 PRJNA1102048 11109 266 1.450777 3.85906682 Puniceicoccaceae bacterium 5H 2508868 Bacteria Bacteria 127 1.68e-32   NR KAF0094689.1 2508868 g11005 i0 67.8 3 90 27 99.2 2 1 264 190 279 KAF0094689.1 MAG: glycoside hydrolase family 5 [Puniceicoccaceae bacterium 5H] diamond 798 127 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales Puniceicoccaceae   Puniceicoccaceae bacterium 5H
29435761 29435761 PRJNA1102048_P_NODE_9250_length_287_cov_1.378505_g9146_i0 PRJNA1102048 9250 287 1.378505 3.95630935 Verrucomicrobiia bacterium Tous-C4TDCM 1982332 Bacteria Bacteria 75.5 4.85e-14   NR PAW72949.1 1982332 g9146 i0 50 4.66202090592335 80 37 80.5 2 279 49 155 234 PAW72949.1 MAG: hypothetical protein B9S38_04715 [Verrucomicrobiia bacterium Tous-C4TDCM] diamond 1338 75.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium Tous-C4TDCM
29837744 29837744 PRJNA1102048_P_NODE_551_length_923_cov_47.436471_g477_i0 PRJNA1102048 551 923 47.436471 437.83862733 Bacteria 2 Bacteria Bacteria 263 9.9e-84   NR MEY4488007.1 2026799 g477 i0 56.5 12.1170097508126 246 107 80 0 800 63 11 256 MEY4488007.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 11184 263 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29878264 29878264 PRJNA1102048_P_NODE_4071_length_422_cov_4.389685_g3967_i0 PRJNA1102048 4071 422 4.389685 18.5244707 Chthoniobacter sp. 2510640 Bacteria Bacteria 54.7 1.82e-5   NR MDR3402202.1 2510640 g3967 i0 33.6 0.9739336492891 137 78 94.5 5 20 418 51 178 MDR3402202.1 autotransporter domain-containing protein [Chthoniobacter sp.] diamond 411 54.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Chthoniobacter Chthoniobacter sp.
29995953 29995953 PRJNA1102048_P_NODE_3771_length_439_cov_2.978142_g3667_i0 PRJNA1102048 3771 439 2.978142 13.07404338 Bacteria 2 Bacteria Bacteria 74.3 3.22e-12   NR MEI7773446.1 2026799 g3667 i0 34.7 1.66059225512528 121 76 81.3 2 373 17 1979 2098 MEI7773446.1 Ig-like domain-containing protein [Verrucomicrobiota bacterium] diamond 729 74.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30857456 30857456 PRJNA1102048_P_NODE_13994_length_248_cov_1.760000_g13890_i0 PRJNA1102048 13994 248 1.76 4.3648 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 77.8 1.21e-15   NR MEI7821940.1 2026799 g13890 i0 58.6 0.701612903225806 58 21 70.2 1 248 75 124 178 MEI7821940.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 174 77.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30943802 30943802 PRJNA1102048_P_NODE_654_length_875_cov_9.312968_g573_i0 PRJNA1102048 654 875 9.312968 81.48847 Pseudomonadati 3379134 Bacteria Bacteria 255 6.000000000000001e-81   NR MEY4488007.1 2026799 g573 i0 55.2 11.1325714285714 248 111 85 0 101 844 9 256 MEY4488007.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 9741 255 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31015509 31015509 PRJNA1102048_P_NODE_10855_length_269_cov_1.178571_g10751_i0 PRJNA1102048 10855 269 1.178571 3.17035599 Cerasicoccus maritimus 490089 Bacteria Bacteria 98.6 2.91e-24   NR WP_309398103.1 490089 g10751 i0 52.7 5.0631970260223 93 40 99.3 1 1 267 22 114 WP_309398103.1 group 1 truncated hemoglobin [Cerasicoccus maritimus] diamond 1362 98.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales Cerasicoccaceae Cerasicoccus Cerasicoccus maritimus
31227855 31227855 PRJNA1102048_P_NODE_10755_length_270_cov_1.258883_g10651_i0 PRJNA1102048 10755 270 1.258883 3.3989841 Pseudomonadati 3379134 Bacteria Bacteria 119 2.82e-29   NR MBS0648627.1 2026799 g10651 i0 65.2 4.96666666666667 89 30 98.9 1 3 269 284 371 MBS0648627.1 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase [Verrucomicrobiota bacterium] diamond 1341 120 0.991666666666667 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31647726 31647726 PRJNA1102048_P_NODE_16957_length_242_cov_1.455621_g16853_i0 PRJNA1102048 16957 242 1.455621 3.52260282 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 99.8 8.87e-23   NR RYD71398.1 2026800 g16853 i0 68 0.929752066115702 75 22 90.5 2 224 6 233 307 RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] diamond 225 99.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
31647728 31647728 PRJNA1102048_P_NODE_177_length_1362_cov_3.576416_g136_i0 PRJNA1102048 177 1362 3.576416 48.71078592 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 286 1.58e-89   NR RYD71398.1 2026800 g136 i0 44.8 0.781938325991189 355 183 76.9 6 95 1141 14 361 RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] diamond 1065 286 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
32185833 32185833 PRJNA1102048_P_NODE_518_length_947_cov_27.597254_g445_i0 PRJNA1102048 518 947 27.597254 261.34599538 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 264 2.85e-84   NR HEY6205988.1 2201154 g445 i0 54.8 5.51214361140443 252 114 79.8 0 845 90 1 252 HEY6205988.1 glucose 1-dehydrogenase [Chthoniobacterales bacterium] diamond 5220 264 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
32217439 32217439 PRJNA1102048_P_NODE_6338_length_343_cov_1.137037_g6234_i0 PRJNA1102048 6338 343 1.137037 3.90003691 Luteolibacter soli 3135280 Bacteria Bacteria 45.1 0.00489   NR WP_341406952.1 3135280 g6234 i0 30.7 0.769679300291545 88 59 75.2 1 293 36 32 119 WP_341406952.1 DoxX family protein [Luteolibacter soli] diamond 264 45.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter soli
32272119 32272119 PRJNA1102048_P_NODE_12858_length_251_cov_0.865169_g12754_i0 PRJNA1102048 12858 251 0.865169 2.17157419 PVC group 1783257 Bacteria Bacteria 43.1 0.0218   NR WP_200356049.1 415221 g12754 i0 41.7 1.32669322709163 60 33 69.3 1 245 72 117 176 WP_200356049.1 nicotinate-nucleotide adenylyltransferase [Pelagicoccus mobilis] diamond 333 43.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales Pelagicoccaceae Pelagicoccus Pelagicoccus mobilis
32407298 32407298 PRJNA1102048_P_NODE_17739_length_241_cov_0.916667_g17635_i0 PRJNA1102048 17739 241 0.916667 2.20916747 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 97.8 4.19e-22   NR MBS0605284.1 2026799 g17635 i0 61 0.95850622406639 77 30 95.9 0 11 241 179 255 MBS0605284.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 231 97.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32470712 32470712 PRJNA1102048_P_NODE_10699_length_270_cov_2.284264_g10595_i0 PRJNA1102048 10699 270 2.284264 6.1675128 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 60.5 2.54e-8   NR HAB16985.1 2026801 g10595 i0 43.7 1.76666666666667 87 39 93.3 3 19 270 36 115 HAB16985.1 hypothetical protein [Verrucomicrobiales bacterium] diamond 477 60.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
32659637 32659637 PRJNA1102048_P_NODE_17540_length_241_cov_0.916667_g17436_i0 PRJNA1102048 17540 241 0.916667 2.20916747 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 97.8 8.930000000000001e-22   NR MDA0749752.1 2026799 g17436 i0 69 0.883817427385892 71 22 88.4 0 214 2 1 71 MDA0749752.1 SGNH/GDSL hydrolase family protein [Verrucomicrobiota bacterium] diamond 213 97.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32785711 32785711 PRJNA1102048_P_NODE_820_length_798_cov_14.568276_g731_i0 PRJNA1102048 820 798 14.568276 116.25484248 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 248 1.68e-78   NR HEY2344067.1 2811408 g731 i0 58.6 4.28195488721805 227 91 84.2 1 124 795 6 232 HEY2344067.1 glucose 1-dehydrogenase [Chthoniobacteraceae bacterium] diamond 3417 248 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;