RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1102048", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA1102048 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28710020 28710020 PRJNA1102048_P_NODE_15207_length_246_cov_0.890173_g15103_i0 PRJNA1102048 15207 246 0.890173 2.18982558 Fidelibacterota bacterium 2026760 Bacteria Bacteria 77.4 2.35e-14   NR MDD5229919.1 2026760 g15103 i0 45 2.92682926829268 80 44 97.6 0 2 241 172 251 MDD5229919.1 tape measure protein [Fidelibacterota bacterium] diamond 720 77.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28741434 28741434 PRJNA1102048_P_NODE_14287_length_248_cov_0.880000_g14183_i0 PRJNA1102048 14287 248 0.88 2.1824 Fidelibacterota bacterium 2026760 Bacteria Bacteria 135 6.53e-35   NR MFQ6609431.1 2026760 g14183 i0 75.6 0.991935483870968 82 20 99.2 0 1 246 375 456 MFQ6609431.1 hypothetical protein [Fidelibacterota bacterium] diamond 246 135 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31354630 31354630 PRJNA1102048_P_NODE_9416_length_285_cov_1.391509_g9312_i0 PRJNA1102048 9416 285 1.391509 3.96580065 FCB group 1783270 Bacteria Bacteria 77.4 1.12e-14   NR MCF7740673.1 2026760 g9312 i0 46.2 15.8631578947368 91 40 95.8 2 10 282 169 250 MCF7740673.1 PhzF family phenazine biosynthesis protein [Fidelibacterota bacterium] diamond 4521 77.8 0.994858611825193 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;