RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1102048", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1102048 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28457401 28457401 PRJNA1102048_P_NODE_17666_length_241_cov_0.916667_g17562_i0 PRJNA1102048 17666 241 0.916667 2.20916747 Minisyncoccota bacterium 2053589 Bacteria Bacteria 48.9 7.09e-5   NR HEU4677629.1 2053589 g17562 i0 46.2 1.1701244813278 52 26 64.7 1 82 237 6 55 HEU4677629.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 282 48.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29435745 29435745 PRJNA1102048_P_NODE_16690_length_243_cov_0.905882_g16586_i0 PRJNA1102048 16690 243 0.905882 2.20129326 Minisyncoccota bacterium 2053589 Bacteria Bacteria 48.9 2.59e-4   NR MDR3570672.1 2053589 g16586 i0 46.2 0.641975308641975 52 27 64.2 1 88 243 813 863 MDR3570672.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 156 48.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30572939 30572939 PRJNA1102048_P_NODE_17613_length_241_cov_0.916667_g17509_i0 PRJNA1102048 17613 241 0.916667 2.20916747 Minisyncoccia bacterium 3120121 Bacteria Bacteria 117 4.7e-31   NR MFQ5540901.1 3120121 g17509 i0 77.2 1.96680497925311 79 18 98.3 0 3 239 10 88 MFQ5540901.1 type 4a pilus biogenesis protein PilO [Minisyncoccia bacterium] diamond 474 117 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia       Minisyncoccia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;