RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1102048", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1102048 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26814616 26814616 PRJNA1102048_P_NODE_17821_length_241_cov_0.916667_g17717_i0 PRJNA1102048 17821 241 0.916667 2.20916747 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 56.6 4.57e-7   NR HEV8306204.1 2072417 g17717 i0 57.5 1.84232365145228 40 17 49.8 0 120 1 1 40 HEV8306204.1 CoA transferase [Candidatus Methylomirabilota bacterium] diamond 444 56.6 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31141541 31141541 PRJNA1102048_P_NODE_15915_length_244_cov_1.789474_g15811_i0 PRJNA1102048 15915 244 1.789474 4.36631656 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 68.2 2.97e-12   NR HXG22717.1 2072417 g15811 i0 70.5 0.540983606557377 44 13 54.1 0 2 133 95 138 HXG22717.1 DUF1772 domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 132 68.2 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;