RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1102048", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Kaiseribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kaiseribacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA1102048 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27920414 27920414 PRJNA1102048_P_NODE_15185_length_246_cov_0.890173_g15081_i0 PRJNA1102048 15185 246 0.890173 2.18982558 Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_ 2030810 Bacteria Bacteria 72.8 9.81e-13   NR OGG62798.1 1798488 g15081 i0 46.1 0.926829268292683 76 39 92.7 1 233 6 314 387 OGG62798.1 MAG: hypothetical protein A2766_00090 [Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_58_22] diamond 228 72.8 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_58_22

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;