RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1102048", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1102048 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26900912 26900912 PRJNA1102048_P_NODE_16401_length_243_cov_1.811765_g16297_i0 PRJNA1102048 16401 243 1.811765 4.40258895 Bacteria 2 Bacteria Bacteria 49.3 1.85e-4   NR UCH93569.1 2052149 g16297 i0 40.3 1.67901234567901 67 39 82.7 1 207 7 498 563 UCH93569.1 MAG: response regulator [Candidatus Aminicenantes bacterium] diamond 408 49.7 0.991951710261569 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
27067566 27067566 PRJNA1102048_P_NODE_13202_length_250_cov_0.870056_g13098_i0 PRJNA1102048 13202 250 0.870056 2.17514 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 58.9 6.69e-8   NR UCH96266.1 2052149 g13098 i0 42.3 1.608 71 36 80.4 2 49 249 5 74 UCH96266.1 MAG: ankyrin repeat domain-containing protein, partial [Candidatus Aminicenantes bacterium] diamond 402 58.9 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;